RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 RIPOR3Q96MK2 946 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 TMEM60Q9H2L4 133 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 POLD4Q9HCU8 107 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 GPRC5CQ9NQ84 441 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 MARCH5Q9NX47 278 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 KLK14Q9P0G3 267 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 USP20Q9Y2K6 914 aa17.71■□□□□ 0.43
ERGIC3-217ENST00000488935 POTEMA6NI47 508 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 ERLIN2O94905 339 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 SEC24BO95487 1268 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 MTHFRP42898 656 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 PTENP60484 403 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 ATAT1Q5SQI0 421 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 GLYCTKQ8IVS8 523 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 SLFN12Q8IYM2 578 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 ST13P5Q8NFI4 369 aaPredicted RBP17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 TCP11Q8WWU5 503 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 KCNH6Q9H252 994 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 NXF3Q9H4D5 531 aaKnown RBP17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 TTC12Q9H892 705 aaPredicted RBP17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 PCDHA12Q9UN75 941 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 IRAK3Q9Y616 596 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 DOCK6Q96HP0 2047 aa17.7■□□□□ 0.42
ERGIC3-217ENST00000488935 ARL5CA6NH57 179 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 H0Y858 1186 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 LILRB3O75022 631 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 ARF4P18085 180 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 GLRA2P23416 452 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 CLCN4P51793 760 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 MBTD1Q05BQ5 628 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 AMHR2Q16671 573 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 KIAA1841Q6NSI8 718 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 COLGALT2Q8IYK4 626 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 TDRD5Q8NAT2 981 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 NECTIN4Q96NY8 510 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 HSD17B14Q9BPX1 270 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 POLR3FQ9H1D9 316 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 SORCS3Q9UPU3 1222 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 USP34Q70CQ2 3546 aa17.69■□□□□ 0.42
ERGIC3-217ENST00000488935 TTLL13PA6NNM8 815 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 ASAP2O43150 1006 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 NPTXRO95502 500 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 ARL2P36404 184 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 NEK4P51957 841 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 PTPN5P54829 565 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 DENND4AQ7Z401 1863 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 WASF1Q92558 559 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 DZANK1Q9NVP4 752 aa17.68■□□□□ 0.42
ERGIC3-217ENST00000488935 NEMFO60524 1076 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 RFPL2O75678 378 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 MCM7P33993 719 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 RARRES1P49788 294 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 MTMR3Q13615 1198 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 NOTUMQ6P988 496 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 GPR149Q86SP6 731 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 PALB2Q86YC2 1186 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 EXOC8Q8IYI6 725 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 TMEM105Q8N8V8 129 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 TMEM175Q9BSA9 504 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 EMILIN2Q9BXX0 1053 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 BRMS1Q9HCU9 246 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 MAN1C1Q9NR34 630 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 KANSL3Q9P2N6 904 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 CNTNAP2Q9UHC6 1331 aa17.67■□□□□ 0.42
ERGIC3-217ENST00000488935 TEX28O15482 410 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 MED24O75448 989 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 SOD2P04179 222 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 NEFLP07196 543 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 RPL17P18621 184 aaKnown RBP17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 LIG1P18858 919 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 GIT2Q14161 759 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 MXD4Q14582 209 aaPredicted RBP17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 RSAD2Q8WXG1 361 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 ATOH1Q92858 354 aaPredicted RBP17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 MTMR9Q96QG7 549 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 GPR62Q9BZJ7 368 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 SFXN1Q9H9B4 322 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 PARP2Q9UGN5 583 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 PPME1Q9Y570 386 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 MYO15AQ9UKN7 3530 aa17.66■□□□□ 0.42
ERGIC3-217ENST00000488935 CACNA1HO95180 2353 aa17.65■□□□□ 0.42
ERGIC3-217ENST00000488935 LRRIQ4A6NIV6 560 aa17.65■□□□□ 0.42
ERGIC3-217ENST00000488935 GAS2O43903 313 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-217ENST00000488935 N4BP1O75113 896 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-217ENST00000488935 URODP06132 367 aa17.65■□□□□ 0.42
ERGIC3-217ENST00000488935 ANAPC15P60006 121 aa17.65■□□□□ 0.42
ERGIC3-217ENST00000488935 DSC1Q08554 894 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms