RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
TRAIP-209ENST00000488860 ZNF568Q3ZCX4 644 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 TWF2Q6IBS0 349 aaKnown RBP13.49□□□□□ -0.25
TRAIP-209ENST00000488860 ARMCX5Q6P1M9 558 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 LRSAM1Q6UWE0 723 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 P2RX5Q93086 422 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 DHTKD1Q96HY7 919 aaPredicted RBP13.49□□□□□ -0.25
TRAIP-209ENST00000488860 ACO2Q99798 780 aaKnown RBP13.49□□□□□ -0.25
TRAIP-209ENST00000488860 TCHPQ9BT92 498 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 KCTD10Q9H3F6 313 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 PDZD7Q9H5P4 517 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 TYW1Q9NV66 732 aaKnown RBP13.49□□□□□ -0.25
TRAIP-209ENST00000488860 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 BICDL2A1A5D9 508 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 NPTXRO95502 500 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 PIGRP01833 764 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 CSF2RAP15509 400 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 CCNE1P24864 410 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 AXLP30530 894 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 RFC2P35250 354 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 CYP2J2P51589 502 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 PMS1P54277 932 aaKnown RBP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 PCBP1Q15365 356 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 MFSD5Q6N075 450 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 ZPBP2Q6X784 338 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 SEPT8Q92599 483 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 BADQ92934 168 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 KCNN1Q92952 543 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 ZBTB45Q96K62 511 aaPredicted RBP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 PCIF1Q9H4Z3 704 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 AGPAT3Q9NRZ7 376 aa13.48□□□□□ -0.25
TRAIP-209ENST00000488860 TDRD15B5MCY1 1934 aaKnown RBP13.48□□□□□ -0.25
TRAIP-209ENST00000488860 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 MGEA5O60502 916 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 TOM1L1O75674 476 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
TRAIP-209ENST00000488860 ZNF445P59923 1031 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 GPNMBQ14956 572 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 TPD52L1Q16890 204 aaPredicted RBP13.47□□□□□ -0.25
TRAIP-209ENST00000488860 PLEKHG4Q58EX7 1191 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 ANKRD40Q6AI12 368 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 DBF4BQ8NFT6 615 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 GOLGA5Q8TBA6 731 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 CBWD1Q9BRT8 395 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 MSTO1Q9BUK6 570 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 NAT10Q9H0A0 1025 aaKnown RBP13.47□□□□□ -0.25
TRAIP-209ENST00000488860 CDT1Q9H211 546 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
TRAIP-209ENST00000488860 GOLGA8IPA6NC78 632 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 GOLGA8JA6NMD2 632 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 PDXKO00764 312 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 CLDN3O15551 220 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 CXCL10P02778 98 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 NR3C1P04150 777 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 ACRP10323 421 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 NR2F2P24468 414 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 HOXA11P31270 313 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-209ENST00000488860 FPGSQ05932 587 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 LRRC63Q05C16 580 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 PPIGQ13427 754 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAIP-209ENST00000488860 TCTN1Q2MV58 587 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 DCAF4L1Q3SXM0 396 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 CEP135Q66GS9 1140 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 SLFN12LQ6IEE8 588 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 CNKSR3Q6P9H4 555 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 APBB1IPQ7Z5R6 666 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-209ENST00000488860 AOPEPQ8N6M6 819 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 APBB2Q92870 758 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 ADAM2Q99965 735 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-209ENST00000488860 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 APOL6Q9BWW8 343 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
TRAIP-209ENST00000488860 HAPLN2Q9GZV7 340 aa13.46□□□□□ -0.25
TRAIP-209ENST00000488860 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 MCF2P10911 925 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 GARTP22102 1010 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 PROZP22891 400 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 ERCC5P28715 1186 aaPredicted RBP13.45□□□□□ -0.26
TRAIP-209ENST00000488860 ZNF165P49910 485 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms