RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 AGMOQ6ZNB7 445 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 DYMQ7RTS9 669 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 TGS1Q96RS0 853 aaKnown RBP20.53■□□□□ 0.88
PTCD3-217ENST00000488801 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 GOLPH3LQ9H4A5 285 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 PTPRHQ9HD43 1115 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 OLFML3Q9NRN5 406 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 SEL1LQ9UBV2 794 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 IPPQ9Y573 584 aa20.53■□□□□ 0.88
PTCD3-217ENST00000488801 A0A1B0GVL5 298 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 H0YCG3 227 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 K7ERI5 159 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 N4BP3O15049 544 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 TRAK2O60296 914 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 KRT18P05783 430 aaKnown RBP20.52■□□□□ 0.88
PTCD3-217ENST00000488801 EEF1DP3Q658K8 133 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 HAUS6Q7Z4H7 955 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 SFR1Q86XK3 245 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 FIBCD1Q8N539 461 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 CNNM3Q8NE01 707 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 ACO2Q99798 780 aaKnown RBP20.52■□□□□ 0.88
PTCD3-217ENST00000488801 C7orf25Q9BPX7 421 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 TNFSF13BQ9Y275 285 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 USP20Q9Y2K6 914 aa20.52■□□□□ 0.88
PTCD3-217ENST00000488801 MRPL42Q9Y6G3 142 aaKnown RBP20.52■□□□□ 0.88
PTCD3-217ENST00000488801 VWA8A3KMH1 1905 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 C5orf67F2Z3F1 127 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 PIGRP01833 764 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 SLFN14P0C7P3 912 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 GAP43P17677 238 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 NDUFA8P51970 172 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 GTF2BQ00403 316 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 EHHADHQ08426 723 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 NCBP1Q09161 790 aaKnown RBP20.51■□□□□ 0.87
PTCD3-217ENST00000488801 BTG3Q14201 252 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-217ENST00000488801 CDR2LQ86X02 465 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-217ENST00000488801 MYCT1Q8N699 235 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 SLC17A8Q8NDX2 589 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
PTCD3-217ENST00000488801 STAMQ92783 540 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 LPPQ93052 612 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 SAMD11Q96NU1 681 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 C17orf80Q9BSJ5 609 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 MRPL4Q9BYD3 311 aaKnown RBP20.51■□□□□ 0.87
PTCD3-217ENST00000488801 USP25Q9UHP3 1055 aa20.51■□□□□ 0.87
PTCD3-217ENST00000488801 K7ENM7 598 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 LPXNO60711 386 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 PAN2Q504Q3 1202 aaKnown RBP20.5■□□□□ 0.87
PTCD3-217ENST00000488801 ATF7IP2Q5U623 682 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 LRRC55Q6ZSA7 311 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 FAM178BQ8IXR5 827 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 LRRC43Q8N309 656 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 HELQQ8TDG4 1101 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 LRRC27Q9C0I9 530 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 NXF3Q9H4D5 531 aaKnown RBP20.5■□□□□ 0.87
PTCD3-217ENST00000488801 CWH43Q9H720 699 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 HCSTQ9UBK5 93 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 RWDD3Q9Y3V2 267 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 COL6A3P12111 3177 aa20.5■□□□□ 0.87
PTCD3-217ENST00000488801 EYSQ5T1H1 3165 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 OFD1O75665 1012 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 NPTXRO95502 500 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 NMT1P30419 496 aaKnown RBP20.49■□□□□ 0.87
PTCD3-217ENST00000488801 COASYQ13057 564 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 DCAF4L1Q3SXM0 396 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 EPC2Q52LR7 807 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 ZPBP2Q6X784 338 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 MAP4K3Q8IVH8 894 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 FSIP1Q8NA03 581 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 FAM161BQ96MY7 647 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
PTCD3-217ENST00000488801 CDX2Q99626 313 aaPredicted RBP20.49■□□□□ 0.87
PTCD3-217ENST00000488801 TARS2Q9BW92 718 aaKnown RBP20.49■□□□□ 0.87
PTCD3-217ENST00000488801 RNF39Q9H2S5 420 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 RSAD1Q9HA92 442 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 TBX20Q9UMR3 447 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 HES2Q9Y543 173 aa20.49■□□□□ 0.87
PTCD3-217ENST00000488801 POU3F3P20264 500 aaPredicted RBP20.48■□□□□ 0.87
PTCD3-217ENST00000488801 IBSPP21815 317 aaPredicted RBP20.48■□□□□ 0.87
PTCD3-217ENST00000488801 ABCD1P33897 745 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 SYKP43405 635 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 AMPD3Q01432 767 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 LONRF3Q496Y0 759 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 ZNF720Q7Z2F6 126 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 HVCN1Q96D96 273 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 MRPL9Q9BYD2 267 aaKnown RBP20.48■□□□□ 0.87
PTCD3-217ENST00000488801 FGFBP2Q9BYJ0 223 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 CDT1Q9H211 546 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 PRDM12Q9H4Q4 367 aa20.48■□□□□ 0.87
PTCD3-217ENST00000488801 LIG1P18858 919 aa20.47■□□□□ 0.87
PTCD3-217ENST00000488801 BMPR1AP36894 532 aa20.47■□□□□ 0.87
PTCD3-217ENST00000488801 ADGRE1Q14246 886 aa20.47■□□□□ 0.87
PTCD3-217ENST00000488801 SLC39A4Q6P5W5 647 aa20.47■□□□□ 0.87
PTCD3-217ENST00000488801 GLB1LQ6UWU2 654 aa20.47■□□□□ 0.87
PTCD3-217ENST00000488801 MPZL3Q6UWV2 235 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms