RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 NR1I2O75469 434 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 GLUD1P00367 558 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 C1RP00736 705 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 YWHABP31946 246 aaKnown RBP21.26■□□□□ 0.99
GGPS1-206ENST00000488594 GLUD2P49448 558 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 NCBP1Q09161 790 aaKnown RBP21.26■□□□□ 0.99
GGPS1-206ENST00000488594 EMC2Q15006 297 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 EPHA7Q15375 998 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 FERMT3Q86UX7 667 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 COLGALT2Q8IYK4 626 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 SIX5Q8N196 739 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 LXNQ9BS40 222 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 WDR6Q9NNW5 1121 aaKnown RBP21.26■□□□□ 0.99
GGPS1-206ENST00000488594 MARCH5Q9NX47 278 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 WRAP73Q9P2S5 460 aaPredicted RBP21.26■□□□□ 0.99
GGPS1-206ENST00000488594 WNT16Q9UBV4 365 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 PRG3Q9Y2Y8 225 aaPredicted RBP21.26■□□□□ 0.99
GGPS1-206ENST00000488594 CYP46A1Q9Y6A2 500 aa21.26■□□□□ 0.99
GGPS1-206ENST00000488594 CCDC195A0A1B0GUA6 201 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 OR1G1P47890 313 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 MXD4Q14582 209 aaPredicted RBP21.25■□□□□ 0.99
GGPS1-206ENST00000488594 NOTUMQ6P988 496 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 RNF168Q8IYW5 571 aaPredicted RBP21.25■□□□□ 0.99
GGPS1-206ENST00000488594 SMG8Q8ND04 991 aaKnown RBP21.25■□□□□ 0.99
GGPS1-206ENST00000488594 HDAC7Q8WUI4 952 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 NXPE3Q969Y0 559 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 RXFP1Q9HBX9 757 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 IPPQ9Y573 584 aa21.25■□□□□ 0.99
GGPS1-206ENST00000488594 RIF1Q5UIP0 2472 aaKnown RBP21.25■□□□□ 0.99
GGPS1-206ENST00000488594 ARL5CA6NH57 179 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 PI15O43692 258 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 XBP1P17861 261 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 DSC1Q08554 894 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 KIAA0319Q5VV43 1072 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 DTWD2Q8NBA8 298 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 AIFM3Q96NN9 605 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 MTRQ99707 1265 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 PHF20Q9BVI0 1012 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 ZSWIM4Q9H7M6 989 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 EPS15L1Q9UBC2 864 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 MYO15AQ9UKN7 3530 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 CLUHO75153 1309 aa21.24■□□□□ 0.99
GGPS1-206ENST00000488594 MARCH6O60337 910 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 TSPAN1O60635 241 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 CDKL5O76039 1030 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 EFEMP2O95967 443 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 GBP2P32456 591 aaPredicted RBP21.23■□□□□ 0.99
GGPS1-206ENST00000488594 XKR9Q5GH70 373 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 GPR65Q8IYL9 337 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 HACE1Q8IYU2 909 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 GAD1Q99259 594 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 KCNJ14Q9UNX9 436 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 FAM186AA6NE01 2351 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 CCNT1O60563 726 aaKnown RBP21.23■□□□□ 0.99
GGPS1-206ENST00000488594 PAPLNO95428 1278 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 MLH1P40692 756 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 PTENP60484 403 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 DSG1Q02413 1049 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 POU5F1BQ06416 359 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 TFDP1Q14186 410 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 ANGPT1Q15389 498 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 TAS1R1Q7RTX1 841 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 SLFN12Q8IYM2 578 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 HAS1Q92839 578 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 COLEC11Q9BWP8 271 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 TM6SF1Q9BZW5 370 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 CSRNP2Q9H175 543 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 PLEKHA4Q9H4M7 779 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.23■□□□□ 0.99
GGPS1-206ENST00000488594 BMP2KQ9NSY1 1161 aaPredicted RBP21.23■□□□□ 0.99
GGPS1-206ENST00000488594 RGL1Q9NZL6 768 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 GIT1Q9Y2X7 761 aa21.23■□□□□ 0.99
GGPS1-206ENST00000488594 N4BP1O75113 896 aaKnown RBP21.22■□□□□ 0.99
GGPS1-206ENST00000488594 IFNLR1Q8IU57 520 aaPredicted RBP21.22■□□□□ 0.99
GGPS1-206ENST00000488594 ADSSL1Q8N142 457 aa21.22■□□□□ 0.99
GGPS1-206ENST00000488594 SMG7Q92540 1137 aaKnown RBP21.22■□□□□ 0.99
GGPS1-206ENST00000488594 EIF2AQ9BY44 585 aaKnown RBP21.22■□□□□ 0.99
GGPS1-206ENST00000488594 CHST7Q9NS84 486 aa21.22■□□□□ 0.99
GGPS1-206ENST00000488594 INO80B-WBP1J3KQ70 363 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 NARSO43776 548 aaKnown RBP21.21■□□□□ 0.99
GGPS1-206ENST00000488594 BAG4O95429 457 aaKnown RBP21.21■□□□□ 0.99
GGPS1-206ENST00000488594 CFHP08603 1231 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 SRFP11831 508 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 RFX1P22670 979 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 CREMQ03060 361 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 STK3Q13188 491 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 NCAPH2Q6IBW4 605 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 PIK3AP1Q6ZUJ8 805 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 ERMP1Q7Z2K6 904 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 SLC44A3Q8N4M1 653 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 ZFP42Q96MM3 310 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 TRIM6Q9C030 488 aaPredicted RBP21.21■□□□□ 0.99
GGPS1-206ENST00000488594 RNF39Q9H2S5 420 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 SEMA4AQ9H3S1 761 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 ZDHHC7Q9NXF8 308 aa21.21■□□□□ 0.99
GGPS1-206ENST00000488594 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.21■□□□□ 0.99
GGPS1-206ENST00000488594 STK36Q9NRP7 1315 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 STK25O00506 426 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 RFPL2O75678 378 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 SCNN1GP51170 649 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms