RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 HBP1O60381 514 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 KRT9P35527 623 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 CASP4P49662 377 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 C17orf53Q8N3J3 647 aaPredicted RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 IKZF4Q9H2S9 585 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 ARVCFO00192 962 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 MAPK13O15264 365 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 CCP110O43303 1012 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 AFPP02771 609 aaKnown RBP13.88□□□□□ -0.19
NELFE-209ENST00000488426 MARK3P27448 753 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 CYP2J2P51589 502 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 ZBED6P86452 979 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 ZNF397Q8NF99 534 aaPredicted RBP13.88□□□□□ -0.19
NELFE-209ENST00000488426 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 DNAJC7Q99615 494 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 EDEM3Q9BZQ6 932 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 AP5M1Q9H0R1 490 aa13.88□□□□□ -0.19
NELFE-209ENST00000488426 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 KIAA0355O15063 1070 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 EXOC3O60645 756 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 LGALS2P05162 132 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
NELFE-209ENST00000488426 GLRA2P23416 452 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 KLK7P49862 253 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
NELFE-209ENST00000488426 IER5Q5VY09 327 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 Q7L0L9 218 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 CCAR2Q8N163 923 aaKnown RBP13.87□□□□□ -0.19
NELFE-209ENST00000488426 SLC43A3Q8NBI5 491 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 SLC35C1Q96A29 364 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 TMEM143Q96AN5 459 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 KIFC3Q9BVG8 833 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 TBX21Q9UL17 535 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 GTPBP10A4D1E9 387 aaKnown RBP13.87□□□□□ -0.19
NELFE-209ENST00000488426 ITGA7Q13683 1181 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 LRIT3Q3SXY7 679 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 BRDTQ58F21 947 aaPredicted RBP13.87□□□□□ -0.19
NELFE-209ENST00000488426 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 E4F1Q66K89 784 aaPredicted RBP13.87□□□□□ -0.19
NELFE-209ENST00000488426 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 NEK11Q8NG66 645 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 TRPV6Q9H1D0 765 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 MMRN2Q9H8L6 949 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 Q9Y3F1 56 aa13.87□□□□□ -0.19
NELFE-209ENST00000488426 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 COL1A2P08123 1366 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 UMODL1Q5DID0 1318 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 A0A0U1RQG5 324 aaPredicted RBP13.86□□□□□ -0.19
NELFE-209ENST00000488426 DCDC2CA8MYV0 355 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 RNF225M0QZC1 329 aaPredicted RBP13.86□□□□□ -0.19
NELFE-209ENST00000488426 CD4P01730 458 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 RAG1P15918 1043 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 KCNMA1Q12791 1236 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 MXD4Q14582 209 aaPredicted RBP13.86□□□□□ -0.19
NELFE-209ENST00000488426 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
NELFE-209ENST00000488426 TCERG1LQ5VWI1 586 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 CYP26C1Q6V0L0 522 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 INTS8Q75QN2 995 aaKnown RBP13.86□□□□□ -0.19
NELFE-209ENST00000488426 C16orf59Q7L2K0 433 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 OR6J1Q8NGC5 347 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 DEPTORQ8TB45 409 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 HSPBP1Q9NZL4 362 aa13.86□□□□□ -0.19
NELFE-209ENST00000488426 ZNF215Q9UL58 517 aaPredicted RBP13.86□□□□□ -0.19
NELFE-209ENST00000488426 PHLPP2Q6ZVD8 1323 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 MMP3P08254 477 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 MYL3P08590 195 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 KRT13P13646 458 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
NELFE-209ENST00000488426 BFSP1Q12934 665 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 STRN3Q13033 797 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
NELFE-209ENST00000488426 PSPC1Q8WXF1 523 aaKnown RBP13.85□□□□□ -0.19
NELFE-209ENST00000488426 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
NELFE-209ENST00000488426 FAM207AQ9NSI2 230 aaPredicted RBP13.85□□□□□ -0.19
NELFE-209ENST00000488426 LRRIQ4A6NIV6 560 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 B4GALT4O60513 344 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 PIGRP01833 764 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 GARTP22102 1010 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 MCCD1P59942 119 aaPredicted RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 CAPSQ13938 189 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 MEA1Q16626 185 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 DGKDQ16760 1214 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 TAS1R3Q7RTX0 852 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms