RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 SEPT4O43236 478 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MSCO60682 206 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 NOL4O94818 638 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 GNRH1P01148 92 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 ADRB2P07550 413 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 KRT13P13646 458 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 HOXD10P28358 340 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 HOXC8P31273 242 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 HNRNPH3P31942 346 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 CLCN1P35523 988 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 FMO5P49326 533 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 PSEN2P49810 448 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 VAMP7P51809 220 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 IGBP1P78318 339 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 ADAM17P78536 824 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MFSD10Q14728 455 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MEA1Q16626 185 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 FSCN1Q16658 493 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 C1orf220Q5T0J3 134 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MAP3K21Q5TCX8 1036 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 TCERG1LQ5VWI1 586 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 SLFN12LQ6IEE8 588 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 RHPN2Q8IUC4 686 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 GPD1LQ8N335 351 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 RNF149Q8NC42 400 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 ZSWIM2Q8NEG5 633 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 NEK11Q8NG66 645 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 PLEKHO2Q8TD55 490 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 POMGNT1Q8WZA1 660 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 ZBTB10Q96DT7 871 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 BICD1Q96G01 975 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MFSD14AQ96MC6 490 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 PCMTD1Q96MG8 357 aaPredicted RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 KATNAL1Q9BW62 490 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 TARS2Q9BW92 718 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 LSM14BQ9BX40 385 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MRPL4Q9BYD3 311 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 GANQ9H2C0 597 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 FZD8Q9H461 694 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 MMRN2Q9H8L6 949 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 KIAA1586Q9HCI6 787 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 AGPAT5Q9NUQ2 364 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 CEP72Q9P209 647 aa9.37□□□□□ -0.91
NUDCD3-209ENST00000487118 A0A0B4J269 797 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 MBLAC1A4D2B0 266 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 GOLGA8IPA6NC78 632 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 GOLGA8JA6NMD2 632 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 ACKR2O00590 384 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 ABLIM1O14639 778 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 P4HA2O15460 535 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 EXTL3O43909 919 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 PRKCBP05771 671 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 GJB1P08034 283 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 MYL3P08590 195 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 TRIM49P0CI25 452 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 TRIM49CP0CI26 452 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SRGAP2CP0DJJ0 459 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SMIM10L2AP0DMW4 78 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SMIM10L2BP0DMW5 78 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 PON1P27169 355 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 TMOD1P28289 359 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 PHKA2P46019 1235 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 CDK17Q00537 523 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 PURAQ00577 322 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 BEX3Q00994 111 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 MBTD1Q05BQ5 628 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 CYP24A1Q07973 514 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 CACNB2Q08289 660 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 TRIM32Q13049 653 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 NOLC1Q14978 699 aaKnown RBP eCLIP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SNRNP35Q16560 246 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 MAPK6Q16659 721 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 FAM187BQ17R55 369 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 EXOC3L4Q17RC7 722 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 KIAA0753Q2KHM9 967 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 E4F1Q66K89 784 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 GBP6Q6ZN66 633 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 ZNF410Q86VK4 478 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 CBWD2Q8IUF1 395 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 TMTC1Q8IUR5 882 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 METTL13Q8N6R0 699 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 RDH13Q8NBN7 331 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 LMBR1Q8WVP7 490 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 BAP1Q92560 729 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SAAL1Q96ER3 474 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 ACO2Q99798 780 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 HAPLN2Q9GZV7 340 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SIX2Q9NPC8 291 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 FAM207AQ9NSI2 230 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SETD4Q9NVD3 440 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 FBXL5Q9UKA1 691 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 USP20Q9Y2K6 914 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms