RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ZNF710Q8N1W2 664 aa14.04□□□□□ -0.16
HDAC6-229ENST00000486665 KCNN1Q92952 543 aa14.04□□□□□ -0.16
HDAC6-229ENST00000486665 GAS2L1Q99501 681 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-229ENST00000486665 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-229ENST00000486665 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
HDAC6-229ENST00000486665 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 TCF20Q9UGU0 1960 aaKnown RBP14.03□□□□□ -0.16
HDAC6-229ENST00000486665 H0YCG3 227 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 M0QZ92 97 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
HDAC6-229ENST00000486665 PRKCBP05771 671 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 LPIN1Q14693 890 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 COBLL1Q53SF7 1204 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 FBXO47Q5MNV8 452 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 LRRC8DQ7L1W4 858 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 FAM228AQ86W67 206 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 GUF1Q8N442 669 aaKnown RBP14.03□□□□□ -0.16
HDAC6-229ENST00000486665 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 ACCSQ96QU6 501 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 GTPBP4Q9BZE4 634 aaKnown RBP14.03□□□□□ -0.16
HDAC6-229ENST00000486665 ANO10Q9NW15 660 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 NCOR1O75376 2440 aa14.03□□□□□ -0.16
HDAC6-229ENST00000486665 TET1Q8NFU7 2136 aa14.02□□□□□ -0.16
HDAC6-229ENST00000486665 TANC1Q9C0D5 1861 aa14.02□□□□□ -0.16
HDAC6-229ENST00000486665 ZMYM2Q9UBW7 1377 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 TISP43B9A030 160 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 ANKRD63C9JTQ0 380 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 ACKR2O00590 384 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 B4GALT5O43286 388 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 TGFB1I1O43294 461 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 CCDC192P0DO97 292 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 GHRP10912 638 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 IGFBP4P22692 258 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 ALCAMQ13740 583 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 RAB30Q15771 203 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 STX1AQ16623 288 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 MAPK6Q16659 721 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 FAM187BQ17R55 369 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-229ENST00000486665 STXBP4Q6ZWJ1 553 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 MAP4K3Q8IVH8 894 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 HVCN1Q96D96 273 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 MED15Q96RN5 788 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 TARS2Q9BW92 718 aaKnown RBP14.02□□□□□ -0.17
HDAC6-229ENST00000486665 DNAJC25Q9H1X3 360 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 KCTD10Q9H3F6 313 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 PRMT7Q9NVM4 692 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-229ENST00000486665 MSRAQ9UJ68 235 aa14.02□□□□□ -0.17
HDAC6-229ENST00000486665 UBE4BO95155 1302 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 TNFRSF10AO00220 468 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 TSPAN1O60635 241 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 NBNO60934 754 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 RPS6KA5O75582 802 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ARHGEF15O94989 841 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 SCP2P22307 547 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 CD52P31358 61 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 PMS1P54277 932 aaKnown RBP14.01□□□□□ -0.17
HDAC6-229ENST00000486665 STX17P56962 302 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ZNF445P59923 1031 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 STRN3Q13033 797 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 KNOP1Q1ED39 458 aaKnown RBP14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ANO6Q4KMQ2 910 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 SLC39A4Q6P5W5 647 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 LRSAM1Q6UWE0 723 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 CATSPER4Q7RTX7 472 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 NELFBQ8WX92 580 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-229ENST00000486665 CPB2Q96IY4 423 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ZBTB45Q96K62 511 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ACO2Q99798 780 aaKnown RBP14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ERVK-5Q9HDB9 667 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 PADI3Q9ULW8 664 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 ST3GAL5Q9UNP4 418 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 MYH11P35749 1972 aa14.01□□□□□ -0.17
HDAC6-229ENST00000486665 RFXAPO00287 272 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 PIGRP01833 764 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 ARF4P18085 180 aaPredicted RBP14□□□□□ -0.17
HDAC6-229ENST00000486665 CCNE1P24864 410 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 HOXA11P31270 313 aaPredicted RBP14□□□□□ -0.17
HDAC6-229ENST00000486665 PRPF4BQ13523 1007 aaKnown RBP14□□□□□ -0.17
HDAC6-229ENST00000486665 STIM1Q13586 685 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 EEF1DP3Q658K8 133 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 CENPPQ6IPU0 288 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 DEFB128Q7Z7B8 93 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 CDR2LQ86X02 465 aaPredicted RBP14□□□□□ -0.17
HDAC6-229ENST00000486665 SYCP3Q8IZU3 236 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 P2RX5Q93086 422 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 ASB2Q96Q27 587 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 MRPL4Q9BYD3 311 aaKnown RBP14□□□□□ -0.17
HDAC6-229ENST00000486665 HAPLN2Q9GZV7 340 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 TMX1Q9H3N1 280 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 TMEM206Q9H813 350 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 SLC28A3Q9HAS3 691 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms