RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 AIPL1Q9NZN9 384 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 SWAP70Q9UH65 585 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 DDX20Q9UHI6 824 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MAD2L2Q9UI95 211 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 TTC7AQ9ULT0 858 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 SUFUQ9UMX1 484 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 COL4A3BPQ9Y5P4 624 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 SNED1Q8TER0 1413 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 A0A0A0MRY4 1105 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 CFAP73A6NFT4 308 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 MYMKA6NI61 221 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 E7EVH7 732 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 F8VZ95 297 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SNAP23O00161 211 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 DNM1LO00429 736 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NCANO14594 1321 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 ZBTB39O15060 712 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 BUB1O43683 1085 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NMT2O60551 498 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 PPFIA2O75334 1257 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 GFPT2O94808 682 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 CAMTA2O94983 1202 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FTCDO95954 541 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 EZRP15311 586 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 KLRC1P26715 233 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 PRKCIP41743 596 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 GATA4P43694 442 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SEC24CP53992 1094 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NPEPPSP55786 919 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 MRPS25P82663 173 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FKBP3Q00688 224 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 POU5F1Q01860 360 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 LMNB2Q03252 620 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 IFT88Q13099 833 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 DOC2BQ14184 412 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SLMAPQ14BN4 828 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 RPS6KA1Q15418 735 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 ASIC2Q16515 512 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 PPP2R5EQ16537 467 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 TDRD12Q587J7 1177 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 ZNF831Q5JPB2 1677 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 HYIQ5T013 277 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM83BQ5T0W9 1011 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 GKAP1Q5VSY0 366 aaPredicted RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SUSD4Q5VX71 490 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 DPY19L2P1Q6NXN4 242 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SV2BQ7L1I2 683 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 TMC4Q7Z404 712 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 HEATR3Q7Z4Q2 680 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 TMC3Q7Z5M5 1100 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FBXO33Q7Z6M2 555 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SLFN11Q7Z7L1 901 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NEK8Q86SG6 692 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 CROCCP2Q86T23 111 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 HOOK3Q86VS8 718 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM228AQ86W67 206 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 ATCAYQ86WG3 371 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 TEX11Q8IYF3 940 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 MAB21L3Q8N8X9 362 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NAV1Q8NEY1 1877 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 CCHCR1Q8TD31 782 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 DOT1LQ8TEK3 1739 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 TBC1D22AQ8WUA7 517 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 IFT81Q8WYA0 676 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 CCT6BQ92526 530 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 RAPGEF5Q92565 580 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 LARP4BQ92615 738 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 RAD54LQ92698 747 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 ZNF622Q969S3 477 aaKnown RBP eCLIP5.1□□□□□ -1.596e-18■■□□□ 13.2
SMARCC1-206ENST00000485737 MIEF2Q96C03 454 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 HOOK2Q96ED9 719 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SEC16BQ96JE7 1060 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 PLIN4Q96Q06 1357 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NACC1Q96RE7 527 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 PSMB7Q99436 277 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.1□□□□□ -1.594e-20■□□□□ 10.1
SMARCC1-206ENST00000485737 LSM14BQ9BX40 385 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NEUROG2Q9H2A3 272 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 VEZTQ9HBM0 779 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 IL17RBQ9NRM6 502 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM114A2Q9NRY5 505 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FBXL5Q9UKA1 691 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 INTUQ9ULD6 942 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 ODF2LQ9ULJ1 636 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 TPX2Q9ULW0 747 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC12A4Q9UP95 1085 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 FNDC3AQ9Y2H6 1198 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 STXBP5LQ9Y2K9 1186 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 LEMD3Q9Y2U8 911 aa5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 NOC2LQ9Y3T9 749 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 BZW2Q9Y6E2 419 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-206ENST00000485737 BAZ2AQ9UIF9 1905 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 COL24A1Q17RW2 1714 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 A0A087X0T9 212 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 LOC102724428A0A0B4J2F2 783 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 FRMD3A2A2Y4 597 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TSPY2A6NKD2 308 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TMEM88BA6NKF7 163 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ASAP2O43150 1006 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms