RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 LRRC63Q05C16 580 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 STRN3Q13033 797 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 PAK1Q13153 545 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 EDRF1Q3B7T1 1238 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 ANO6Q4KMQ2 910 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 NELFCDQ8IXH7 590 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 FBXL18Q96ME1 805 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 DNAJC25Q9H1X3 360 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 AGPAT3Q9NRZ7 376 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 EXOC7Q9UPT5 735 aa17.36■□□□□ 0.37
APOE-205ENST00000485628 CAVIN2O95810 425 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 GARTP22102 1010 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 CD52P31358 61 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 RFC2P35250 354 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 MCL1Q07820 350 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 PRPF4BQ13523 1007 aaKnown RBP17.35■□□□□ 0.37
APOE-205ENST00000485628 STIM1Q13586 685 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 NCAPHQ15003 741 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 IQCB1Q15051 598 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 TCTN1Q2MV58 587 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 UBXN11Q5T124 520 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 EEF1DP3Q658K8 133 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 MFSD5Q6N075 450 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 LRRC55Q6ZSA7 311 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 RTN4RL1Q86UN2 441 aaPredicted RBP17.35■□□□□ 0.37
APOE-205ENST00000485628 ENOX1Q8TC92 643 aaKnown RBP17.35■□□□□ 0.37
APOE-205ENST00000485628 NELFBQ8WX92 580 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 ZBTB45Q96K62 511 aaPredicted RBP17.35■□□□□ 0.37
APOE-205ENST00000485628 SCLT1Q96NL6 688 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 ANP32EQ9BTT0 268 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 HSD3B7Q9H2F3 369 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 PDZD7Q9H5P4 517 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 DACH1Q9UI36 760 aa17.35■□□□□ 0.37
APOE-205ENST00000485628 TRIM49BA6NDI0 452 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 RGS19P49795 217 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 ATF7IP2Q5U623 682 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 CATSPER4Q7RTX7 472 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 GAS2L3Q86XJ1 694 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 CCDC51Q96ER9 411 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 SCLYQ96I15 445 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
APOE-205ENST00000485628 IKBKBO14920 756 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 HNRNPDLO14979 420 aaKnown RBP17.33■□□□□ 0.36
APOE-205ENST00000485628 MGEA5O60502 916 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 ERLIN2O94905 339 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 CCL23P55773 120 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 FAM189BP81408 668 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 SLFN12LQ6IEE8 588 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 MPZL3Q6UWV2 235 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 IRF2BP1Q8IU81 584 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 DHX40Q8IX18 779 aaKnown RBP17.33■□□□□ 0.36
APOE-205ENST00000485628 CRIPAKQ8N1N5 446 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 CBWD1Q9BRT8 395 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 CTNND2Q9UQB3 1225 aa17.33■□□□□ 0.36
APOE-205ENST00000485628 BICDL2A1A5D9 508 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 N4BP3O15049 544 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 KIAA0391O15091 583 aaKnown RBP17.32■□□□□ 0.36
APOE-205ENST00000485628 ZNF623O75123 536 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 ADRB2P07550 413 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 ZNF165P49910 485 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 LIG4P49917 911 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 POU5F1Q01860 360 aaKnown RBP17.32■□□□□ 0.36
APOE-205ENST00000485628 PAK2Q13177 524 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 SPATA1Q5VX52 437 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 KLHL10Q6JEL2 608 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 NOTUMQ6P988 496 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 CRELD2Q6UXH1 353 aaPredicted RBP17.32■□□□□ 0.36
APOE-205ENST00000485628 SYCP3Q8IZU3 236 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 ZSWIM2Q8NEG5 633 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 DBF4BQ8NFT6 615 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 LINC01599Q8WXQ3 324 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 BORCS6Q96GS4 357 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
APOE-205ENST00000485628 CDT1Q9H211 546 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 TSPY26PQ9H489 355 aa17.32■□□□□ 0.36
APOE-205ENST00000485628 TTC3P53804 2025 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 CLIC2O15247 247 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 MAPK13O15264 365 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 CLDN3O15551 220 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 CALUO43852 315 aaPredicted RBP17.31■□□□□ 0.36
APOE-205ENST00000485628 NR3C1P04150 777 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 MCF2P10911 925 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 RAG1P15918 1043 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 STX17P56962 302 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
APOE-205ENST00000485628 SLC27A1Q6PCB7 646 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 C16orf59Q7L2K0 433 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 HS2ST1Q7LGA3 356 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 APBB2Q92870 758 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 FTHL17Q9BXU8 183 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 TSPYL2Q9H2G4 693 aaPredicted RBP17.31■□□□□ 0.36
APOE-205ENST00000485628 CBX8Q9HC52 389 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 RGS18Q9NS28 235 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
APOE-205ENST00000485628 A0A0U1RQF3 1178 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 C9IYK1 514 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms