RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 LENG9Q96B70 501 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.21
SSR4-210ENST00000485612 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 NELL2Q99435 816 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.21
SSR4-210ENST00000485612 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 GABBR1Q9UBS5 961 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 CEP131Q9UPN4 1083 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 FAN1Q9Y2M0 1017 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.21
SSR4-210ENST00000485612 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 GAS2O43903 313 aaKnown RBP13.7□□□□□ -0.22
SSR4-210ENST00000485612 ZNF862O60290 1169 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 GDF9O60383 454 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 B4GALT3O60512 393 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 CSDE1O75534 798 aaKnown RBP13.7□□□□□ -0.22
SSR4-210ENST00000485612 PAPLNO95428 1278 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 SOD2P04179 222 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 SKIP12755 728 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 RPS9P46781 194 aaKnown RBP13.7□□□□□ -0.22
SSR4-210ENST00000485612 GPC3P51654 580 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 NRLP54845 237 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 FGD1P98174 961 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 PFKPQ01813 784 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 KRT32Q14532 448 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 NTRK3Q16288 839 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 UGCGQ16739 394 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 PRR16Q569H4 304 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 ZNF746Q6NUN9 644 aaPredicted RBP13.7□□□□□ -0.22
SSR4-210ENST00000485612 PRR23BQ6ZRT6 265 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 LINC01465Q8N7H1 131 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 KCNB2Q92953 911 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 GJA10Q969M2 543 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
SSR4-210ENST00000485612 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 C6orf50Q9HD87 102 aa13.7□□□□□ -0.22
SSR4-210ENST00000485612 PATJQ8NI35 1801 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
SSR4-210ENST00000485612 DDHD2O94830 711 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 PSAPP07602 524 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 FSHRP23945 695 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
SSR4-210ENST00000485612 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
SSR4-210ENST00000485612 MTAPQ13126 283 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 CSRP2Q16527 193 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
SSR4-210ENST00000485612 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
SSR4-210ENST00000485612 TAS1R1Q7RTX1 841 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 URGCPQ8TCY9 931 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 NLRP7Q8WX94 980 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 PRKD2Q9BZL6 878 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
SSR4-210ENST00000485612 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 ZMIZ1Q9ULJ6 1067 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 PCDHA10Q9Y5I2 948 aa13.69□□□□□ -0.22
SSR4-210ENST00000485612 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 NRP1O14786 923 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 MSH4O15457 936 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 CHMP2AO43633 222 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
SSR4-210ENST00000485612 CIITAP33076 1130 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 PRKCEQ02156 737 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 MTSS1LQ765P7 747 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 SMAP1Q8IYB5 467 aaPredicted RBP13.68□□□□□ -0.22
SSR4-210ENST00000485612 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 CDH7Q9ULB5 785 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
SSR4-210ENST00000485612 MTCL1Q9Y4B5 1905 aaKnown RBP13.68□□□□□ -0.22
SSR4-210ENST00000485612 CCDC196A0A1B0GTZ2 297 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 TGM5O43548 720 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 ZNF623O75123 536 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 C1RP00736 705 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 OATP04181 439 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 RPS6KB1P23443 525 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 HSPA4P34932 840 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 GLUD2P49448 558 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
SSR4-210ENST00000485612 FZD5Q13467 585 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 DRP2Q13474 957 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 TPRG1Q6ZUI0 275 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 CCDC12Q8WUD4 166 aaPredicted RBP13.67□□□□□ -0.22
SSR4-210ENST00000485612 PGBD4Q96DM1 585 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
SSR4-210ENST00000485612 GCOM2Q9BZD3 368 aaPredicted RBP13.67□□□□□ -0.22
SSR4-210ENST00000485612 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms