RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ANKRD40Q6AI12 368 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 HS2ST1Q7LGA3 356 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 GOLGA5Q8TBA6 731 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 TSG101Q99816 390 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 NAT10Q9H0A0 1025 aaKnown RBP19.25■□□□□ 0.67
CHMP3-207ENST00000485465 TSPY26PQ9H489 355 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 AGPAT3Q9NRZ7 376 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 CGNQ9P2M7 1197 aaKnown RBP19.25■□□□□ 0.67
CHMP3-207ENST00000485465 TRAF3IP3Q9Y228 551 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 TNFSF13BQ9Y275 285 aa19.25■□□□□ 0.67
CHMP3-207ENST00000485465 A0A1B0GUA9 196 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 BICDL2A1A5D9 508 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 TRIM49BA6NDI0 452 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 N4BP3O15049 544 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 TOM1L1O75674 476 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 CXCL10P02778 98 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 PROZP22891 400 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 MFSD5Q6N075 450 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 NOTUMQ6P988 496 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 DPF3Q92784 378 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 ZBTB45Q96K62 511 aaPredicted RBP19.24■□□□□ 0.67
CHMP3-207ENST00000485465 MED15Q96RN5 788 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 IFIH1Q9BYX4 1025 aaKnown RBP19.24■□□□□ 0.67
CHMP3-207ENST00000485465 TMX1Q9H3N1 280 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 PDZD7Q9H5P4 517 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 PTPRHQ9HD43 1115 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 CHST12Q9NRB3 414 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
CHMP3-207ENST00000485465 STYXL1Q9Y6J8 313 aa19.24■□□□□ 0.67
CHMP3-207ENST00000485465 ABLIM1O14639 778 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 CLIC2O15247 247 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 ADSSP30520 456 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 LRRC63Q05C16 580 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 EDRF1Q3B7T1 1238 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 PLEKHG4Q58EX7 1191 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 EEF1DP3Q658K8 133 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 SLFN12LQ6IEE8 588 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 TTI2Q6NXR4 508 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 FOXR2Q6PJQ5 311 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 MPZL3Q6UWV2 235 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 CDR2LQ86X02 465 aaPredicted RBP19.23■□□□□ 0.67
CHMP3-207ENST00000485465 TMEM199Q8N511 208 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 SEPT8Q92599 483 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 CCDC51Q96ER9 411 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 BPIFA3Q9BQP9 254 aa19.23■□□□□ 0.67
CHMP3-207ENST00000485465 TANC1Q9C0D5 1861 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 CLDN3O15551 220 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 CAVIN2O95810 425 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 GARTP22102 1010 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 ZNF165P49910 485 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 MCL1Q07820 350 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 DSC3Q14574 896 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 NFIL3Q16649 462 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 FAM43BQ6ZT52 329 aaPredicted RBP19.22■□□□□ 0.67
CHMP3-207ENST00000485465 DEFB128Q7Z7B8 93 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 C12orf56Q8IXR9 622 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 DBF4BQ8NFT6 615 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 TMEM174Q8WUU8 243 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 POMGNT1Q8WZA1 660 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 DUSP9Q99956 384 aaKnown RBP19.22■□□□□ 0.67
CHMP3-207ENST00000485465 CBWD1Q9BRT8 395 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 TCHPQ9BT92 498 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 HAPLN2Q9GZV7 340 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 ANKFY1Q9P2R3 1169 aa19.22■□□□□ 0.67
CHMP3-207ENST00000485465 A0A0B4J269 797 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 NR3C1P04150 777 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 CSF2RAP15509 400 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
CHMP3-207ENST00000485465 MATR3P43243 847 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHMP3-207ENST00000485465 MYBPC2Q14324 1141 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 ZNF568Q3ZCX4 644 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 SLC27A1Q6PCB7 646 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 ZBTB33Q86T24 672 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 SLC9A9Q8IVB4 645 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 ENOX1Q8TC92 643 aaKnown RBP19.21■□□□□ 0.67
CHMP3-207ENST00000485465 APBB2Q92870 758 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 VWCEQ96DN2 955 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 ADPGKQ9BRR6 497 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 CDT1Q9H211 546 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 PCIF1Q9H4Z3 704 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 DMAC2Q9NW81 257 aa19.21■□□□□ 0.67
CHMP3-207ENST00000485465 MGEA5O60502 916 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 MCF2P10911 925 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 RPL13P26373 211 aaKnown RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 FKBP3Q00688 224 aaKnown RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 NOLC1Q14978 699 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 DCAF4L1Q3SXM0 396 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 UBXN11Q5T124 520 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 SPATA1Q5VX52 437 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 TWF2Q6IBS0 349 aaKnown RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 ZC3H3Q8IXZ2 948 aaKnown RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 RPUSD2Q8IZ73 545 aaKnown RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 BADQ92934 168 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 MSTO1Q9BUK6 570 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 FTHL17Q9BXU8 183 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 HSPBP1Q9NZL4 362 aa19.2■□□□□ 0.66
CHMP3-207ENST00000485465 AGO2Q9UKV8 859 aaKnown RBP19.2■□□□□ 0.66
CHMP3-207ENST00000485465 ZMYND8Q9ULU4 1186 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms