RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TTC12Q9H892 705 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-205ENST00000485397 MARCH5Q9NX47 278 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 MIOSQ9NXC5 875 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 SORCS3Q9UPU3 1222 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 PRG3Q9Y2Y8 225 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-205ENST00000485397 HES2Q9Y543 173 aa21.42■■□□□ 1.02
COL27A1-205ENST00000485397 MYO10Q9HD67 2058 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 INO80B-WBP1J3KQ70 363 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 AXLP30530 894 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 ARL2P36404 184 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 TXKP42681 527 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 CAPSQ13938 189 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 TAS1R1Q7RTX1 841 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 DIS3L2Q8IYB7 885 aaKnown RBP21.41■■□□□ 1.02
COL27A1-205ENST00000485397 COLGALT2Q8IYK4 626 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 TDRD5Q8NAT2 981 aaKnown RBP21.41■■□□□ 1.02
COL27A1-205ENST00000485397 PRRX2Q99811 253 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 EMILIN2Q9BXX0 1053 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 UBN1Q9NPG3 1134 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 ANKEF1Q9NU02 776 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 LIMD1Q9UGP4 676 aa21.41■■□□□ 1.02
COL27A1-205ENST00000485397 C2CD2LO14523 706 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 NEFLP07196 543 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 MLH1P40692 756 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 OR1G1P47890 313 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 CLCN4P51793 760 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 MBTD1Q05BQ5 628 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 MTMR3Q13615 1198 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 TFDP1Q14186 410 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 AMHR2Q16671 573 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 NOTUMQ6P988 496 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 IFNLR1Q8IU57 520 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-205ENST00000485397 ZDHHC14Q8IZN3 488 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 PIGOQ8TEQ8 1089 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 APOL6Q9BWW8 343 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 CSRNP2Q9H175 543 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 MRPL17Q9NRX2 175 aaKnown RBP21.4■■□□□ 1.02
COL27A1-205ENST00000485397 KMT2EQ8IZD2 1858 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 ARID2Q68CP9 1835 aa21.4■■□□□ 1.02
COL27A1-205ENST00000485397 ARL5CA6NH57 179 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 SPDYE4A6NLX3 237 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 NEMFO60524 1076 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 DGAT1O75907 488 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 SOD2P04179 222 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 GLRA2P23416 452 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 RARRES1P49788 294 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 SCNN1GP51170 649 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 POU5F1BQ06416 359 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 PCBP1Q15365 356 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL27A1-205ENST00000485397 GPR149Q86SP6 731 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 UBALD2Q8IYN6 164 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 CCDC51Q96ER9 411 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 ZFP42Q96MM3 310 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 MTMR9Q96QG7 549 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 HERC2P3Q9BVR0 1158 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 SFXN1Q9H9B4 322 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 STK39Q9UEW8 545 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 USTQ9Y2C2 406 aa21.39■■□□□ 1.01
COL27A1-205ENST00000485397 F8W810 466 aa21.38■■□□□ 1.01
COL27A1-205ENST00000485397 INPPL1O15357 1258 aa21.38■■□□□ 1.01
COL27A1-205ENST00000485397 ARF4P18085 180 aaPredicted RBP21.38■■□□□ 1.01
COL27A1-205ENST00000485397 DSC1Q08554 894 aa21.38■■□□□ 1.01
COL27A1-205ENST00000485397 NCBP1Q09161 790 aaKnown RBP21.38■■□□□ 1.01
COL27A1-205ENST00000485397 CDR2LQ86X02 465 aaPredicted RBP21.38■■□□□ 1.01
COL27A1-205ENST00000485397 CCDC43Q96MW1 224 aaKnown RBP21.38■■□□□ 1.01
COL27A1-205ENST00000485397 POLR3FQ9H1D9 316 aaPredicted RBP21.38■■□□□ 1.01
COL27A1-205ENST00000485397 TMEM60Q9H2L4 133 aa21.38■■□□□ 1.01
COL27A1-205ENST00000485397 POTEMA6NI47 508 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 B4GALT5O43286 388 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 URODP06132 367 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 ATP2B1P20020 1258 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 NEK4P51957 841 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 ST3GAL1Q11201 340 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 MAEAQ7L5Y9 396 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 PLCD3Q8N3E9 789 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 RPS6KC1Q96S38 1066 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 NXF3Q9H4D5 531 aaKnown RBP21.37■■□□□ 1.01
COL27A1-205ENST00000485397 FAM86C1Q9NVL1 165 aa21.37■■□□□ 1.01
COL27A1-205ENST00000485397 WDFY4Q6ZS81 3184 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 USO1O60763 962 aaKnown RBP21.36■■□□□ 1.01
COL27A1-205ENST00000485397 EFEMP2O95967 443 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 MYBP10242 640 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 AKAP5P24588 427 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 TRIM29Q14134 588 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 RNF168Q8IYW5 571 aaPredicted RBP21.36■■□□□ 1.01
COL27A1-205ENST00000485397 NFKBIZQ9BYH8 718 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 TRIM6Q9C030 488 aaPredicted RBP21.36■■□□□ 1.01
COL27A1-205ENST00000485397 GPRC5CQ9NQ84 441 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 GIT1Q9Y2X7 761 aa21.36■■□□□ 1.01
COL27A1-205ENST00000485397 TEX28O15482 410 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 NPTXRO95502 500 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 SPATA31C1P0DKV0 1188 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 GUCY1B3Q02153 619 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 KIAA0319Q5VV43 1072 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 CCDC149Q6ZUS6 474 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 GSTCDQ8NEC7 633 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 ACSF2Q96CM8 615 aaPredicted RBP21.35■■□□□ 1.01
COL27A1-205ENST00000485397 MAN1C1Q9NR34 630 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
COL27A1-205ENST00000485397 KLK14Q9P0G3 267 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms