RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 CEP95Q96GE4 821 aa4.32□□□□□ -1.72
CAPN8-210ENST00000484873 RMDN3Q96TC7 470 aa4.32□□□□□ -1.72
CAPN8-210ENST00000484873 APOL6Q9BWW8 343 aa4.32□□□□□ -1.72
CAPN8-210ENST00000484873 GTPBP2Q9BX10 602 aaKnown RBP4.32□□□□□ -1.72
CAPN8-210ENST00000484873 ZNF287Q9HBT7 754 aa4.32□□□□□ -1.72
CAPN8-210ENST00000484873 GDE1Q9NZC3 331 aa4.32□□□□□ -1.72
CAPN8-210ENST00000484873 PLEKHB1Q9UF11 243 aaPredicted RBP4.32□□□□□ -1.72
CAPN8-210ENST00000484873 MBD1Q9UIS9 605 aaPredicted RBP4.32□□□□□ -1.72
CAPN8-210ENST00000484873 KCNH3Q9ULD8 1083 aa4.32□□□□□ -1.72
CAPN8-210ENST00000484873 ZMYM6O95789 1325 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 DCLK1O15075 740 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TLX3O43711 291 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 GAS2O43903 313 aaKnown RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SH3BP5O60239 455 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 XYLBO75191 536 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 NR3C2P08235 984 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 HNRNPA1P09651 372 aaKnown RBP eCLIP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SPATA31D3P0C874 917 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 MYBP10242 640 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 HOXC13P31276 330 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SEMG2Q02383 582 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 GFPT1Q06210 699 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 PDE4CQ08493 712 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TMEM62Q0P6H9 643 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 KCNH2Q12809 1159 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TSR1Q2NL82 804 aaKnown RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TMEM259Q4ZIN3 620 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 PPP4R3BQ5MIZ7 849 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SLC9C2Q5TAH2 1124 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 BROXQ5VW32 411 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SLC23A3Q6PIS1 610 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SPATA31D4Q6ZUB0 917 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SLCO6A1Q86UG4 719 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TRIM50Q86XT4 487 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TICAM1Q8IUC6 712 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 SYT12Q8IV01 421 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 MAP4K3Q8IVH8 894 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 NAXDQ8IW45 347 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 NPAS3Q8IXF0 933 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 ZNF444Q8N0Y2 327 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 LCORLQ8N3X6 602 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 FAM200AQ8TCP9 573 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 TAAR1Q96RJ0 339 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 RPS6KC1Q96S38 1066 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 PLA2G2FQ9BZM2 168 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 C8orf33Q9H7E9 229 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 ZFP14Q9HCL3 533 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 ZNF334Q9HCZ1 680 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 BMP2KQ9NSY1 1161 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 RNF19AQ9NV58 838 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 DNAAF2Q9NVR5 837 aaKnown RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 ARPP21Q9UBL0 812 aaPredicted RBP4.31□□□□□ -1.72
CAPN8-210ENST00000484873 ST3GAL5Q9UNP4 418 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 DOCK8Q8NF50 2099 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 KIAA1217Q5T5P2 1943 aa4.31□□□□□ -1.72
CAPN8-210ENST00000484873 PCNX2A6NKB5 2137 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 WDR19Q8NEZ3 1342 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 RRN3P2A6NIE6 340 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 TNFRSF10BO14763 440 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ZNF263O14978 683 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SRGAP3O43295 1099 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MAP3K7O43318 606 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SUV39H1O43463 412 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 TGM5O43548 720 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SOD2P04179 222 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CFIP05156 583 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 GALTP07902 379 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ZSCAN20P17040 1043 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 PSMC3P17980 439 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 EIF2AK2P19525 551 aaKnown RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 GDI1P31150 447 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 HOXD12P35452 270 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 DHPSP49366 369 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 NTHL1P78549 312 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SP2Q02086 613 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CCINQ13939 588 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 GRM2Q14416 872 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 NEDD9Q14511 834 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 TTF1Q15361 905 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 USP39Q53GS9 565 aaKnown RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 C2orf27AQ580R0 203 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CLLU1OSQ5K130 101 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MARCH8Q5T0T0 291 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 C6orf118Q5T5N4 469 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SYDE2Q5VT97 1194 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 HIST2H2BCQ6DN03 193 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CTR9Q6PD62 1173 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 METTL7BQ6UX53 244 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 TMEM92Q6UXU6 159 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 RABEPKQ7Z6M1 372 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ZC3H18Q86VM9 953 aaKnown RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 VSIG10LQ86VR7 867 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 RALGPS2Q86X27 583 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MCF2L2Q86YR7 1114 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 TMC8Q8IU68 726 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 WWC1Q8IX03 1113 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SPACA3Q8IXA5 215 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MINDY1Q8N5J2 469 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms