RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DDHD2O94830 711 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 IL9P15248 144 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 AKAP5P24588 427 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 LTBRP36941 435 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 SLC11A1P49279 550 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 ALDH7A1P49419 539 aaKnown RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 PEX3P56589 373 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 PLCB3Q01970 1234 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 LEXMQ3ZCV2 418 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 HYIQ5T013 277 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 FOXD4L5Q5VV16 416 aaPredicted RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 SLC27A1Q6PCB7 646 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 DAW1Q8N136 415 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 LRRC15Q8TF66 581 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 BCL7CQ8WUZ0 217 aaPredicted RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 FOXD4L4Q8WXT5 416 aaPredicted RBP13.56□□□□□ -0.24
MSH5-216ENST00000484309 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 SNX21Q969T3 373 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 TCF25Q9BQ70 676 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 FZD8Q9H461 694 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 KLK14Q9P0G3 267 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 XIRP2A4UGR9 3374 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 A0A1B0GUA9 196 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 ARL5CA6NH57 179 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 HIDE1A8MVS5 230 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 FSCN2O14926 492 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 STX6O43752 255 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 BMP15O95972 392 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 UBA7P41226 1012 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 NDUFV1P49821 464 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 SCNN1GP51170 649 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 KRT17Q04695 432 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 MAPK7Q13164 816 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 COL19A1Q14993 1142 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 KARSQ15046 597 aaKnown RBP13.55□□□□□ -0.24
MSH5-216ENST00000484309 PTPAQ15257 358 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 MAPK6Q16659 721 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 SPECC1Q5M775 1068 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
MSH5-216ENST00000484309 C1orf186Q6ZWK4 172 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 PPP2R3CQ969Q6 453 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 TMEM169Q96HH4 297 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 FAM193BQ96PV7 902 aaPredicted RBP13.55□□□□□ -0.24
MSH5-216ENST00000484309 NT5C3AQ9H0P0 336 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 TLE6Q9H808 572 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 MIOSQ9NXC5 875 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 PUF60Q9UHX1 559 aaKnown RBP13.55□□□□□ -0.24
MSH5-216ENST00000484309 LZTS1Q9Y250 596 aa13.55□□□□□ -0.24
MSH5-216ENST00000484309 N4BP3O15049 544 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
MSH5-216ENST00000484309 GALTP07902 379 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 PLCG1P19174 1290 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 NPTX2P47972 431 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 ADAM15Q13444 863 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 FAM187BQ17R55 369 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 LLGL2Q6P1M3 1020 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 AUTS2Q8WXX7 1259 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 CALML4Q96GE6 196 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 AK8Q96MA6 479 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 DRC1Q96MC2 740 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
MSH5-216ENST00000484309 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
MSH5-216ENST00000484309 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
MSH5-216ENST00000484309 K7ERI5 159 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 ACKR2O00590 384 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 SLC16A4O15374 487 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 GLP2RO95838 553 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 LONP1P36776 959 aaKnown RBP13.53□□□□□ -0.24
MSH5-216ENST00000484309 OR1G1P47890 313 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 SLC12A3P55017 1021 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 DMP1Q13316 513 aaPredicted RBP13.53□□□□□ -0.24
MSH5-216ENST00000484309 MCM6Q14566 821 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 NT5DC1Q5TFE4 455 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 HACE1Q8IYU2 909 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms