RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 UPF3BQ9BZI7 483 aaKnown RBP6.94□□□□□ -1.3
PTCD3-215ENST00000484203 DISC1Q9NRI5 854 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 C1orf112Q9NSG2 853 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 TMEM260Q9NX78 707 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 VPS54Q9P1Q0 977 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 TRPV2Q9Y5S1 764 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 MTCH2Q9Y6C9 303 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 CDY2AQ9Y6F7 541 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 DNMT3AQ9Y6K1 912 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-215ENST00000484203 STK36Q9NRP7 1315 aa6.94□□□□□ -1.3
PTCD3-215ENST00000484203 MCM3APO60318 1980 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 CCDC194A0A1B0GVG4 234 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 FSD2A1L4K1 749 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 ENPP3O14638 875 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 TBX3O15119 743 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 PFKFB2O60825 505 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 CCNE2O96020 404 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 CELA2BP08218 269 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 DNM2P50570 870 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 PCBP4P57723 403 aaKnown RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 MGAT3Q09327 533 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 MTMR3Q13615 1198 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 TRIM29Q14134 588 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 ADGRE1Q14246 886 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 LPIN1Q14693 890 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 TIGD5Q53EQ6 642 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 LRCH2Q5VUJ6 765 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 ZNF385CQ66K41 422 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 PPP4R3AQ6IN85 833 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 RUFY4Q6ZNE9 571 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 RAB44Q7Z6P3 723 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 NPAS4Q8IUM7 802 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 SLFN12Q8IYM2 578 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 RGL4Q8IZJ4 473 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 FIBCD1Q8N539 461 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 GOLGA6L1Q8N7Z2 621 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 TBCKQ8TEA7 893 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 PPM1EQ8WY54 764 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 SLC5A5Q92911 643 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 PGBD1Q96JS3 809 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 C11orf84Q9BUA3 381 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 FAM49AQ9H0Q0 323 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 LMAN2LQ9H0V9 348 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 NCOA5Q9HCD5 579 aaKnown RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 CHD7Q9P2D1 2997 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 GDF2Q9UK05 429 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-215ENST00000484203 USP20Q9Y2K6 914 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 UNC80Q8N2C7 3258 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 IGSF9BQ9UPX0 1349 aa6.93□□□□□ -1.3
PTCD3-215ENST00000484203 CDH23Q9H251 3354 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 PRUNE2Q8WUY3 3088 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 DENND3A2RUS2 1198 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 C5orf67F2Z3F1 127 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 DDX39AO00148 427 aaKnown RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 ZBTB39O15060 712 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 MSH4O15457 936 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 MARCH6O60337 910 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 RPS6KA5O75582 802 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 BAG4O95429 457 aaKnown RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 ARAFP10398 606 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 CRYBB1P53674 252 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 TBC1D8BQ0IIM8 1120 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 GRB10Q13322 594 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 XKR3Q5GH77 459 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 ZNF468Q5VIY5 522 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 NEK8Q86SG6 692 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 SYT9Q86SS6 491 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 CCDC60Q8IWA6 550 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 TMEM192Q8IY95 271 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 CMTR2Q8IYT2 770 aaKnown RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 KIAA0319LQ8IZA0 1049 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 METTL13Q8N6R0 699 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 BHMTQ93088 406 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 LENG9Q96B70 501 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 MRPL38Q96DV4 380 aaKnown RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 INO80BQ9C086 356 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 GABBR1Q9UBS5 961 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 DDX25Q9UHL0 483 aaKnown RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 FAM50BQ9Y247 325 aa6.92□□□□□ -1.3
PTCD3-215ENST00000484203 BAZ2BQ9UIF8 2168 aaKnown RBP6.92□□□□□ -1.3
PTCD3-215ENST00000484203 TRANK1O15050 2925 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 LCHNA4D1U4 455 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 H3BNC9 293 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 GAS2O43903 313 aaKnown RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 PSMD10O75832 226 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 C22orf31O95567 290 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 BRD1O95696 1058 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 ZSCAN20P17040 1043 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 ADH6P28332 368 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 GRNP28799 593 aaKnown RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 CD52P31358 61 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 BMPR1AP36894 532 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 SERPINB4P48594 390 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 SARSP49591 514 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms