RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 A0A087WZ62 844 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 STK25O00506 426 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 SLC26A4O43511 780 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 PI15O43692 258 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 MAFO75444 373 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 HSP90AA1P07900 732 aaKnown RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 GALTP07902 379 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 CTSAP10619 480 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 KLRC2P26717 231 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 RPA1P27694 616 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 PHKA2P46019 1235 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 CLCN5P51795 746 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 ATP2C1P98194 919 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 FOXK2Q01167 660 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 PTGDRQ13258 359 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 GIT2Q14161 759 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 DTHD1Q6ZMT9 781 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 ANO5Q75V66 913 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 DDX53Q86TM3 631 aaKnown RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 SLC22A17Q8WUG5 538 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 BCL7CQ8WUZ0 217 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 IGSF21Q96ID5 467 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 FDXACB1Q9BRP7 624 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 NRDE2Q9H7Z3 1164 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 TBC1D13Q9NVG8 400 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 FBXL21Q9UKT6 434 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 PIN4Q9Y237 131 aaKnown RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 PCDHB6Q9Y5E3 794 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 MORC2Q9Y6X9 1032 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-213ENST00000484112 MYO10Q9HD67 2058 aa11.11□□□□□ -0.63
CPSF4-213ENST00000484112 PLXNA3P51805 1871 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-213ENST00000484112 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 STX6O43752 255 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 MYBP10242 640 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 SFPQP23246 707 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPSF4-213ENST00000484112 POLGP54098 1239 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-213ENST00000484112 NOMO2Q5JPE7 1267 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 CWF19L1Q69YN2 538 aaKnown RBP11.1□□□□□ -0.63
CPSF4-213ENST00000484112 GLB1LQ6UWU2 654 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 CCDC149Q6ZUS6 474 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 PPFIBP1Q86W92 1011 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 TPH2Q8IWU9 490 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 DYDC2Q96IM9 177 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 AK8Q96MA6 479 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 NACC1Q96RE7 527 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 DHX33Q9H6R0 707 aaKnown RBP11.1□□□□□ -0.63
CPSF4-213ENST00000484112 SFXN1Q9H9B4 322 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 FAM105AQ9NUU6 356 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 DNAJB4Q9UDY4 337 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 LRWD1Q9UFC0 647 aa11.1□□□□□ -0.63
CPSF4-213ENST00000484112 POTEMA6NI47 508 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 ASAP2O43150 1006 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 OFD1O75665 1012 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 DGAT1O75907 488 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 SKIP12755 728 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 NPR3P17342 541 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 ID4P47928 161 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 SLC11A1P49279 550 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 TDGQ13569 410 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 CTTNQ14247 550 aaKnown RBP11.09□□□□□ -0.63
CPSF4-213ENST00000484112 PCBP1Q15365 356 aaKnown RBP eCLIP11.09□□□□□ -0.63
CPSF4-213ENST00000484112 PTPN14Q15678 1187 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 KRT79Q5XKE5 535 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 OTOP3Q7RTS5 596 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 CATSPER4Q7RTX7 472 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 ZNF280BQ86YH2 543 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 KSR1Q8IVT5 923 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 SIX5Q8N196 739 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 KLHL5Q96PQ7 755 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 FAM193BQ96PV7 902 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-213ENST00000484112 EMILIN2Q9BXX0 1053 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 INO80BQ9C086 356 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-213ENST00000484112 KCNK12Q9HB15 430 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 RGL1Q9NZL6 768 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 SUCLA2Q9P2R7 463 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-213ENST00000484112 IRAK3Q9Y616 596 aa11.09□□□□□ -0.63
CPSF4-213ENST00000484112 C2CD2LO14523 706 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 SPATA31C1P0DKV0 1188 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 AOC1P19801 751 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 RFX1P22670 979 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 CYP4A11Q02928 519 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 BECN1Q14457 450 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 MXD4Q14582 209 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms