RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 NLRP4Q96MN2 994 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 SCLT1Q96NL6 688 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 EIF2AQ9BY44 585 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 GPR62Q9BZJ7 368 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 RSAD1Q9HA92 442 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 SEPT9Q9UHD8 586 aaPredicted RBP9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 HES2Q9Y543 173 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 CARNS1A5YM72 827 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 ARL5CA6NH57 179 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 GAS7O60861 476 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 LILRB5O75023 590 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 GLUD1P00367 558 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 GLUD2P49448 558 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 ATXN1P54253 815 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 AK2P54819 239 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 NPEPPSP55786 919 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 ZNF528Q3MIS6 628 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 DCLRE1AQ6PJP8 1040 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 SYNE3Q6ZMZ3 975 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 CATSPER4Q7RTX7 472 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 SKAP1Q86WV1 359 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 PALB2Q86YC2 1186 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 ZBTB44Q8NCP5 570 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 RDM1Q8NG50 284 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 HDAC7Q8WUI4 952 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 KCNB2Q92953 911 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 PGBD4Q96DM1 585 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 GAD1Q99259 594 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 DHX33Q9H6R0 707 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 CACNG4Q9UBN1 327 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 STK39Q9UEW8 545 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 VAV3Q9UKW4 847 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 PRG3Q9Y2Y8 225 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 IPPQ9Y573 584 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 MIA3Q5JRA6 1907 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 ARID2Q68CP9 1835 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 COL4A2P08572 1712 aa9.68□□□□□ -0.86
RTFDC1-208ENST00000484084 CNTNAP2Q9UHC6 1331 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TDRD15B5MCY1 1934 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 STK25O00506 426 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 ZBTB39O15060 712 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TSPAN1O60635 241 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 ADH1AP07327 375 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TDGF1P13385 188 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 RPL17P18621 184 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 MLH1P40692 756 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 NTHL1P78549 312 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 AMHR2Q16671 573 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TBCKQ8TEA7 893 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 RABGGTAQ92696 567 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TMEM143Q96AN5 459 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 PAAF1Q9BRP4 392 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 TEKT3Q9BXF9 490 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 AGXT2Q9BYV1 514 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 INO80BQ9C086 356 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 CXCL16Q9H2A7 254 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 ANO2Q9NQ90 1003 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 ZDHHC7Q9NXF8 308 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 VPS54Q9P1Q0 977 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 KANSL3Q9P2N6 904 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 CACNA1BQ00975 2339 aa9.67□□□□□ -0.86
RTFDC1-208ENST00000484084 KANSL1LA0AUZ9 987 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 ADAM12O43184 909 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 SLC37A4O43826 429 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 GAS2O43903 313 aaKnown RBP9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 ZMYND10O75800 440 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 URODP06132 367 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 CD72P21854 359 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 IGFBP6P24592 240 aaPredicted RBP9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 GNA11P29992 359 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 OR1G1P47890 313 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 SCNN1GP51170 649 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 RTP2Q5QGT7 225 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 VARS2Q5ST30 1063 aaKnown RBP9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 GET4Q7L5D6 327 aaPredicted RBP9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 MIER3Q7Z3K6 550 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 FBXL16Q8N461 479 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 ITFG1Q8TB96 612 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 URGCPQ8TCY9 931 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 STAMQ92783 540 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 CLDN23Q96B33 292 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 CLSTN3Q9BQT9 956 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 PLEKHA4Q9H4M7 779 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 PARD6AQ9NPB6 346 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 XPNPEP1Q9NQW7 623 aa9.66□□□□□ -0.86
RTFDC1-208ENST00000484084 FNIP2Q9P278 1114 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms