RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 H3BNC9 293 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 N4BP3O15049 544 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 CSPG5O95196 566 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 RB1P06400 928 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 ITGA4P13612 1032 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 SMTNP53814 917 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 GIT2Q14161 759 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 CCDC85BQ15834 202 aaPredicted RBP14.75□□□□□ -0.05
SSR1-208ENST00000483409 NT5DC1Q5TFE4 455 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 EEF1DP3Q658K8 133 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 SV2BQ7L1I2 683 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 DYMQ7RTS9 669 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 TAS1R3Q7RTX0 852 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 MRPL10Q7Z7H8 261 aaKnown RBP14.75□□□□□ -0.05
SSR1-208ENST00000483409 SPIRE2Q8WWL2 714 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 SPATA32Q96LK8 384 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 C11orf84Q9BUA3 381 aaPredicted RBP14.75□□□□□ -0.05
SSR1-208ENST00000483409 NXF3Q9H4D5 531 aaKnown RBP14.75□□□□□ -0.05
SSR1-208ENST00000483409 RSAD1Q9HA92 442 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 LARSQ9P2J5 1176 aaKnown RBP14.75□□□□□ -0.05
SSR1-208ENST00000483409 RCOR1Q9UKL0 485 aa14.75□□□□□ -0.05
SSR1-208ENST00000483409 TBCAO75347 108 aaKnown RBP14.74□□□□□ -0.05
SSR1-208ENST00000483409 OFD1O75665 1012 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 PBX3P40426 434 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 NOMO2Q5JPE7 1267 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 MYCT1Q8N699 235 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 TMEM161BQ8NDZ6 487 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 CNNM3Q8NE01 707 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 URGCPQ8TCY9 931 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 LEO1Q8WVC0 666 aaPredicted RBP14.74□□□□□ -0.05
SSR1-208ENST00000483409 DHX58Q96C10 678 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 ADPGKQ9BRR6 497 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 PLVAPQ9BX97 442 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 MRPL9Q9BYD2 267 aaKnown RBP14.74□□□□□ -0.05
SSR1-208ENST00000483409 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 TMEM134Q9H6X4 195 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 ALG13Q9NP73 1137 aaKnown RBP14.74□□□□□ -0.05
SSR1-208ENST00000483409 AAASQ9NRG9 546 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
SSR1-208ENST00000483409 PCDHB12Q9Y5F1 795 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 ATP6V1DQ9Y5K8 247 aa14.74□□□□□ -0.05
SSR1-208ENST00000483409 MYMKA6NI61 221 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 GRM6O15303 877 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 ITGB1P05556 798 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 MAPTP10636 758 aaKnown RBP14.73□□□□□ -0.05
SSR1-208ENST00000483409 LAG3P18627 525 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 POU3F3P20264 500 aaPredicted RBP14.73□□□□□ -0.05
SSR1-208ENST00000483409 AKAP5P24588 427 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 AFF1P51825 1210 aaKnown RBP14.73□□□□□ -0.05
SSR1-208ENST00000483409 ZNF131P52739 623 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 NCKAP1LP55160 1127 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 NUCB2P80303 420 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 ATF7IP2Q5U623 682 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 RESP18Q5W5W9 173 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 THNSL1Q8IYQ7 743 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 HACE1Q8IYU2 909 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 KLHL23Q8NBE8 558 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 DDX12PQ92771 950 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 STAMQ92783 540 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 GAD1Q99259 594 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 NTPCRQ9BSD7 190 aaKnown RBP14.73□□□□□ -0.05
SSR1-208ENST00000483409 TARS2Q9BW92 718 aaKnown RBP14.73□□□□□ -0.05
SSR1-208ENST00000483409 MRPL4Q9BYD3 311 aaKnown RBP14.73□□□□□ -0.05
SSR1-208ENST00000483409 GBP3Q9H0R5 595 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 TBC1D13Q9NVG8 400 aa14.73□□□□□ -0.05
SSR1-208ENST00000483409 K7ENM7 598 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 ZC3H11AO75152 810 aaKnown RBP eCLIP14.72□□□□□ -0.05
SSR1-208ENST00000483409 POMCP01189 267 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 MLH1P40692 756 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 RNASELQ05823 741 aaKnown RBP14.72□□□□□ -0.05
SSR1-208ENST00000483409 STRN3Q13033 797 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 E2F4Q16254 413 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 PTPROQ16827 1216 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 DCAF4L1Q3SXM0 396 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 HAUS6Q7Z4H7 955 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 P2RX5Q93086 422 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 MRPL38Q96DV4 380 aaKnown RBP14.72□□□□□ -0.05
SSR1-208ENST00000483409 ZFP42Q96MM3 310 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 ZNF558Q96NG5 402 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 ACO2Q99798 780 aaKnown RBP14.72□□□□□ -0.05
SSR1-208ENST00000483409 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 UBN1Q9NPG3 1134 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 FAM13BQ9NYF5 915 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 KLK14Q9P0G3 267 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 PARP2Q9UGN5 583 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 KCNG1Q9UIX4 513 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 PLAGL2Q9UPG8 496 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 TNFSF13BQ9Y275 285 aa14.72□□□□□ -0.05
SSR1-208ENST00000483409 ARL5CA6NH57 179 aa14.71□□□□□ -0.05
SSR1-208ENST00000483409 H0YCG3 227 aa14.71□□□□□ -0.05
SSR1-208ENST00000483409 POLR2DO15514 142 aaKnown RBP14.71□□□□□ -0.05
SSR1-208ENST00000483409 TRAK2O60296 914 aa14.71□□□□□ -0.05
SSR1-208ENST00000483409 FGF18O76093 207 aa14.71□□□□□ -0.05
SSR1-208ENST00000483409 DNAJB1P25685 340 aa14.71□□□□□ -0.05
SSR1-208ENST00000483409 NMT1P30419 496 aaKnown RBP14.71□□□□□ -0.05
SSR1-208ENST00000483409 BCAR1P56945 870 aa14.71□□□□□ -0.05
SSR1-208ENST00000483409 ZNF568Q3ZCX4 644 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms