RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SKIP12755 728 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 AKAP5P24588 427 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 PRPHP41219 470 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 TFDP1Q14186 410 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 CSPP1Q1MSJ5 1256 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 KANK3Q6NY19 840 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 SYCE2Q6PIF2 218 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 TAS1R3Q7RTX0 852 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 TAS1R1Q7RTX1 841 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 GJD3Q8N144 294 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 PDZD7Q9H5P4 517 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 UPF2Q9HAU5 1272 aaKnown RBP13.38□□□□□ -0.27
HDLBP-239ENST00000483086 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 CD207Q9UJ71 328 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 SMC3Q9UQE7 1217 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 TECTAO75443 2155 aa13.38□□□□□ -0.27
HDLBP-239ENST00000483086 ARL5CA6NH57 179 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 NRP1O14786 923 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 NCK2O43639 380 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
HDLBP-239ENST00000483086 ITGA4P13612 1032 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 MUTP22033 750 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 AXLP30530 894 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 PPM1AP35813 382 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 SCNN1GP51170 649 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 DSC1Q08554 894 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 COASYQ13057 564 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 SMAD4Q13485 552 aaKnown RBP13.37□□□□□ -0.27
HDLBP-239ENST00000483086 FAM187BQ17R55 369 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 HAUS3Q68CZ6 603 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 TMC7Q7Z402 723 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 COLGALT2Q8IYK4 626 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 VPS52Q8N1B4 723 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
HDLBP-239ENST00000483086 MCPH1Q8NEM0 835 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 CCDC43Q96MW1 224 aaKnown RBP13.37□□□□□ -0.27
HDLBP-239ENST00000483086 PLIN2Q99541 437 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 S1PR5Q9H228 398 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 KLK14Q9P0G3 267 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
HDLBP-239ENST00000483086 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 FAM86C2PA6NEL3 165 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 LILRB3O75022 631 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-239ENST00000483086 NAMPTP43490 491 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 ALDH7A1P49419 539 aaKnown RBP13.36□□□□□ -0.27
HDLBP-239ENST00000483086 MCM2P49736 904 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 HYIQ5T013 277 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
HDLBP-239ENST00000483086 RINT1Q6NUQ1 792 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 C1orf186Q6ZWK4 172 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
HDLBP-239ENST00000483086 RNF168Q8IYW5 571 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-239ENST00000483086 SUSD6Q92537 303 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 CCDC51Q96ER9 411 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 USP15Q9Y4E8 981 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-239ENST00000483086 HCFC2Q9Y5Z7 792 aa13.36□□□□□ -0.27
HDLBP-239ENST00000483086 SFI1A8K8P3 1242 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 H3BQV1 296 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 LAD1O00515 517 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PTGESO14684 152 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 MEFVO15553 781 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 HIP1RO75146 1068 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PRKCBP05771 671 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 CTSAP10619 480 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 LIG1P18858 919 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 KRT17Q04695 432 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PCBP1Q15365 356 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PTPN14Q15678 1187 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 NAB2Q15742 525 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 ANKRD54Q6NXT1 300 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 DTHD1Q6ZMT9 781 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
HDLBP-239ENST00000483086 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PRMT7Q9NVM4 692 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 PRG3Q9Y2Y8 225 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-239ENST00000483086 ANK1P16157 1881 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 ACKR2O00590 384 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 ABLIM1O14639 778 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 CXCL14O95715 111 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms