RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
PHGDH-205ENST00000482968 CNOT6LQ96LI5 555 aaKnown RBP16.44■□□□□ 0.22
PHGDH-205ENST00000482968 ACO2Q99798 780 aaKnown RBP16.44■□□□□ 0.22
PHGDH-205ENST00000482968 TCHPQ9BT92 498 aa16.44■□□□□ 0.22
PHGDH-205ENST00000482968 SEZ6LQ9BYH1 1024 aa16.44■□□□□ 0.22
PHGDH-205ENST00000482968 HSPBP1Q9NZL4 362 aa16.44■□□□□ 0.22
PHGDH-205ENST00000482968 EXOC3O60645 756 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 AKAP3O75969 853 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ERLIN2O94905 339 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 RPLP2P05387 115 aaKnown RBP16.43■□□□□ 0.22
PHGDH-205ENST00000482968 AMHR2Q16671 573 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 FAM187BQ17R55 369 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 CCDC40Q4G0X9 1142 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ZPBP2Q6X784 338 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 CDR2LQ86X02 465 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-205ENST00000482968 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 C12orf56Q8IXR9 622 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ANKLE1Q8NAG6 615 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ZSWIM2Q8NEG5 633 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 CPB2Q96IY4 423 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 PAWRQ96IZ0 340 aaKnown RBP16.43■□□□□ 0.22
PHGDH-205ENST00000482968 TRIM5Q9C035 493 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ANKFY1Q9P2R3 1169 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 TRPV2Q9Y5S1 764 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 GOLGA8IPA6NC78 632 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 GOLGA8JA6NMD2 632 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 CLDN3O15551 220 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 PQBP1O60828 265 aaKnown RBP16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ATF7IP2Q5U623 682 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 SLFN12LQ6IEE8 588 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 CATSPER4Q7RTX7 472 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 FAM126BQ8IXS8 530 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 XXYLT1Q8NBI6 393 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 ANKRD20A12PQ8NF67 263 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 SAAL1Q96ER3 474 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 PRIMPOLQ96LW4 560 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
PHGDH-205ENST00000482968 TOM1L1O75674 476 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 GNA14O95837 355 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 COL6A1P12109 1028 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 ARF4P18085 180 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-205ENST00000482968 GARTP22102 1010 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
PHGDH-205ENST00000482968 PSMC2P35998 433 aaKnown RBP16.42■□□□□ 0.22
PHGDH-205ENST00000482968 MTIF2P46199 727 aaKnown RBP16.42■□□□□ 0.22
PHGDH-205ENST00000482968 SPAG1Q07617 926 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 KRT31Q15323 416 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
PHGDH-205ENST00000482968 ZNF618Q5T7W0 954 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 TSHZ1Q6ZSZ6 1077 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 VPS16Q9H269 839 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
PHGDH-205ENST00000482968 TULP1O00294 542 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 TSPAN1O60635 241 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 CD4P01730 458 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 EPB41P11171 864 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 HARSP12081 509 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 CKBP12277 381 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 SFPQP23246 707 aaKnown RBP eCLIP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 UBASH3AP57075 661 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 MGAT3Q09327 533 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 SARM1Q6SZW1 724 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 TMEM174Q8WUU8 243 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 TUBGCP2Q9BSJ2 902 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 TAB2Q9NYJ8 693 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 LIMA1Q9UHB6 759 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 TNFSF13BQ9Y275 285 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 NOC2LQ9Y3T9 749 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 CNTNAP2Q9UHC6 1331 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 A0A0B4J269 797 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 LRRC10BA6NIK2 292 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 ADCY5O95622 1261 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 EEF1DP3Q658K8 133 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 APTXQ7Z2E3 356 aaKnown RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 FAM186BQ8IYM0 893 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 FAM213AQ9BRX8 229 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 MSTO1Q9BUK6 570 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 C11orf49Q9H6J7 331 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 PTPRHQ9HD43 1115 aa16.41■□□□□ 0.22
PHGDH-205ENST00000482968 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-205ENST00000482968 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
PHGDH-205ENST00000482968 SLC16A3O15427 465 aaKnown RBP16.4■□□□□ 0.22
PHGDH-205ENST00000482968 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
PHGDH-205ENST00000482968 HOXA11P31270 313 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-205ENST00000482968 ACOT2P49753 483 aa16.4■□□□□ 0.22
PHGDH-205ENST00000482968 COPB1P53618 953 aaKnown RBP16.4■□□□□ 0.22
PHGDH-205ENST00000482968 PCBP1Q15365 356 aaKnown RBP eCLIP16.4■□□□□ 0.22
PHGDH-205ENST00000482968 ZNF568Q3ZCX4 644 aa16.4■□□□□ 0.22
PHGDH-205ENST00000482968 TRIM60Q495X7 471 aa16.4■□□□□ 0.22
PHGDH-205ENST00000482968 SEZ6Q53EL9 994 aa16.4■□□□□ 0.22
PHGDH-205ENST00000482968 MPZL3Q6UWV2 235 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms