RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 SMTNP53814 917 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 PPFIA1Q13136 1202 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 DUSP28Q4G0W2 176 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 TOGARAM2Q6ZUX3 1019 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 PLPPR4Q7Z2D5 763 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 RDH13Q8NBN7 331 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 TMEM161BQ8NDZ6 487 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 ATP8B4Q8TF62 1192 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 NDST4Q9H3R1 872 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 SMARCAD1Q9H4L7 1026 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
APTX-225ENST00000482687 UBE4BO95155 1302 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
APTX-225ENST00000482687 CTAGE15A4D2H0 777 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 AKR1B15C9JRZ8 316 aaPredicted RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 ANKRD63C9JTQ0 380 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 KIF5CO60282 957 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 GYPCP04921 128 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 CTAGE8P0CG41 777 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 MAPTP10636 758 aaKnown RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 SCP2P22307 547 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 YY1P25490 414 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 CCT5P48643 541 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
APTX-225ENST00000482687 GTF2BQ00403 316 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 IQSEC1Q6DN90 963 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 CTAGE6Q86UF2 777 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 CTAGE4Q8IX94 777 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 TC2NQ8N9U0 490 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 FAM76AQ8TAV0 307 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 FAM212AQ96EL1 285 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 IFT74Q96LB3 600 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 CBWD1Q9BRT8 395 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 HPCAL4Q9UM19 191 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 TBX20Q9UMR3 447 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 GOLGA8IPA6NC78 632 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 LRRIQ4A6NIV6 560 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 GOLGA8JA6NMD2 632 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 RBAK-RBAKDNI3L0D1 243 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 GJB1P08034 283 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 ZNF865P0CJ78 1059 aaPredicted RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 RPL13P26373 211 aaKnown RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 ARL2P36404 184 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 IRAK1P51617 712 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 NOGQ13253 232 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 DCAF17Q5H9S7 520 aaPredicted RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 FKBP15Q5T1M5 1219 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 HS2ST1Q7LGA3 356 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 YTHDF3Q7Z739 585 aaKnown RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 PPTC7Q8NI37 304 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 FAM167AQ96KS9 214 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 PANX2Q96RD6 677 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 APBA2Q99767 749 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 JPH2Q9BR39 696 aaPredicted RBP11.29□□□□□ -0.6
APTX-225ENST00000482687 CRACR2AQ9BSW2 395 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 MMRN2Q9H8L6 949 aa11.29□□□□□ -0.6
APTX-225ENST00000482687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
APTX-225ENST00000482687 SIP14410 1827 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 CTAGE9A4FU28 777 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 EIF3HO15372 352 aaKnown RBP eCLIP11.28□□□□□ -0.6
APTX-225ENST00000482687 PHACTR2O75167 634 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 MAFO75444 373 aaPredicted RBP11.28□□□□□ -0.6
APTX-225ENST00000482687 GNA14O95837 355 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 MMP3P08254 477 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 HOXC6P09630 235 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
APTX-225ENST00000482687 RFC5P40937 340 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 APLP1P51693 650 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 FCGRTP55899 365 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 APBA1Q02410 837 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 TCERG1LQ5VWI1 586 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 TAS1R3Q7RTX0 852 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 FAM186BQ8IYM0 893 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 MAGEC3Q8TD91 643 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 SPIRE2Q8WWL2 714 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
APTX-225ENST00000482687 PPP1R16BQ96T49 567 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 ERAP1Q9NZ08 941 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 ARMCX3Q9UH62 379 aaPredicted RBP11.28□□□□□ -0.6
APTX-225ENST00000482687 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
APTX-225ENST00000482687 ITIH6Q6UXX5 1313 aa11.28□□□□□ -0.6
APTX-225ENST00000482687 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms