RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 HACE1Q8IYU2 909 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 SLC39A11Q8N1S5 342 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 RSPH1Q8WYR4 309 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 CALML4Q96GE6 196 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 PRIMPOLQ96LW4 560 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 UHRF1Q96T88 793 aaPredicted RBP18.28■□□□□ 0.52
VAMP4-204ENST00000482519 GAD1Q99259 594 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 TCF25Q9BQ70 676 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 NXF3Q9H4D5 531 aaKnown RBP18.28■□□□□ 0.52
VAMP4-204ENST00000482519 NRDE2Q9H7Z3 1164 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 UBN1Q9NPG3 1134 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 DNAJB4Q9UDY4 337 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 TTC28Q96AY4 2481 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 ARL5CA6NH57 179 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 TTLL13PA6NNM8 815 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 SFI1A8K8P3 1242 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 PER2O15055 1255 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 PLA2G4BP0C869 781 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 MARCKSP29966 332 aaPredicted RBP18.27■□□□□ 0.52
VAMP4-204ENST00000482519 MLH1P40692 756 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 DMP1Q13316 513 aaPredicted RBP18.27■□□□□ 0.52
VAMP4-204ENST00000482519 DHX8Q14562 1220 aaKnown RBP18.27■□□□□ 0.52
VAMP4-204ENST00000482519 CLUL1Q15846 466 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 LEXMQ3ZCV2 418 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 HYIQ5T013 277 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 C1orf186Q6ZWK4 172 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 TMC7Q7Z402 723 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 TMEM169Q96HH4 297 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 DRC1Q96MC2 740 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 ZFP42Q96MM3 310 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 PARP2Q9UGN5 583 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 LZTS1Q9Y250 596 aa18.27■□□□□ 0.52
VAMP4-204ENST00000482519 K7ERI5 159 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 ACKR2O00590 384 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 N4BP3O15049 544 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 DDHD2O94830 711 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 GALTP07902 379 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
VAMP4-204ENST00000482519 NPTX2P47972 431 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 NDUFV1P49821 464 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 EFNA5P52803 228 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 FAM187BQ17R55 369 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
VAMP4-204ENST00000482519 PTCRAQ6ISU1 281 aaPredicted RBP18.26■□□□□ 0.51
VAMP4-204ENST00000482519 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.26■□□□□ 0.51
VAMP4-204ENST00000482519 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
VAMP4-204ENST00000482519 CCDC113Q9H0I3 377 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 PDZD7Q9H5P4 517 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 KLK14Q9P0G3 267 aa18.26■□□□□ 0.51
VAMP4-204ENST00000482519 NPHP3-ACAD11A0A0J9YXS1 232 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 B4GALT3O60512 393 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 LTBRP36941 435 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 SLC11A1P49279 550 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 DLX2Q07687 328 aaPredicted RBP18.25■□□□□ 0.51
VAMP4-204ENST00000482519 KARSQ15046 597 aaKnown RBP18.25■□□□□ 0.51
VAMP4-204ENST00000482519 SPECC1Q5M775 1068 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 PDE12Q6L8Q7 609 aaKnown RBP18.25■□□□□ 0.51
VAMP4-204ENST00000482519 TMEM173Q86WV6 379 aaPredicted RBP18.25■□□□□ 0.51
VAMP4-204ENST00000482519 DAW1Q8N136 415 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
VAMP4-204ENST00000482519 IGSF21Q96ID5 467 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 ZSCAN16Q9H4T2 348 aaPredicted RBP18.25■□□□□ 0.51
VAMP4-204ENST00000482519 KMT5AQ9NQR1 393 aa18.25■□□□□ 0.51
VAMP4-204ENST00000482519 HIDE1A8MVS5 230 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 FSCN2O14926 492 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 SLC16A4O15374 487 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 ALDH2P05091 517 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 EDN1P05305 212 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 GUCY2CP25092 1073 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 SCNN1GP51170 649 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 SLC12A3P55017 1021 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
VAMP4-204ENST00000482519 ADAM15Q13444 863 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 PTPAQ15257 358 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 CTC1Q2NKJ3 1217 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 VPS52Q8N1B4 723 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 KCTD17Q8N5Z5 321 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 EFHBQ8N7U6 833 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 BCL7CQ8WUZ0 217 aaPredicted RBP18.24■□□□□ 0.51
VAMP4-204ENST00000482519 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 TIPINQ9BVW5 301 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 NGRNQ9NPE2 291 aaKnown RBP18.24■□□□□ 0.51
VAMP4-204ENST00000482519 MIOSQ9NXC5 875 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 FAN1Q9Y2M0 1017 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 GIT1Q9Y2X7 761 aa18.24■□□□□ 0.51
VAMP4-204ENST00000482519 TNFRSF10AO00220 468 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 SLC26A4O43511 780 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 TBX10O75333 385 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 KRT18P05783 430 aaKnown RBP18.23■□□□□ 0.51
VAMP4-204ENST00000482519 PLCG1P19174 1290 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 OR1G1P47890 313 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
VAMP4-204ENST00000482519 MAPK7Q13164 816 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 SMC1AQ14683 1233 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms