RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NQO1P15559 274 aaKnown RBP13.62□□□□□ -0.23
VPS52-218ENST00000482399 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
VPS52-218ENST00000482399 HHATQ5VTY9 493 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 ERICH1Q86X53 443 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 ERP27Q96DN0 273 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
VPS52-218ENST00000482399 CBWD1Q9BRT8 395 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 PI4K2AQ9BTU6 479 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 TRAF3IP3Q9Y228 551 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 LAMB4A4D0S4 1761 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 TGFB1I1O43294 461 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 SPATA31C1P0DKV0 1188 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 ATP5DP30049 168 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 HOXD13P35453 343 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 GNPTABQ3T906 1256 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 SLC47A2Q86VL8 602 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 ARHGEF19Q8IW93 802 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 ATP8B4Q8TF62 1192 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 DHX38Q92620 1227 aaKnown RBP13.62□□□□□ -0.23
VPS52-218ENST00000482399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS52-218ENST00000482399 ZNF148Q9UQR1 794 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
VPS52-218ENST00000482399 GOLGA8RI6L899 631 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 CA4P22748 312 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 COILP38432 576 aaPredicted RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 PEX3P56589 373 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 BFSP1Q12934 665 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 AUHQ13825 339 aaKnown RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 SYCP2LQ5T4T6 812 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 EXOC3L1Q86VI1 746 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 ZSWIM1Q9BR11 485 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 KIFC3Q9BVG8 833 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 EXOC1LA0A1B0GW35 172 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 SLC16A4O15374 487 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 EYA4O95677 639 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 KRT16P08779 473 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 ITGA8P53708 1063 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 ABCB5Q2M3G0 1257 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 TBC1D16Q8TBP0 767 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 CPA5Q8WXQ8 436 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 KLF6Q99612 283 aaPredicted RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 GLT8D2Q9H1C3 349 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 NUP188Q5SRE5 1749 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 SERPINB2P05120 415 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 GAP43P17677 238 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 CHKAP35790 457 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 VAMP7P51809 220 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 SLC13A5Q86YT5 568 aaPredicted RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
VPS52-218ENST00000482399 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 HAO1Q9UJM8 370 aa13.61□□□□□ -0.23
VPS52-218ENST00000482399 MIF4GDA9UHW6 222 aaKnown RBP13.6□□□□□ -0.23
VPS52-218ENST00000482399 DDX3YO15523 660 aaKnown RBP13.6□□□□□ -0.23
VPS52-218ENST00000482399 SNX3O60493 162 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 BMP3P12645 472 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 CD58P19256 250 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 PRKCIP41743 596 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 DYNLT1P63172 113 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 XRCC4Q13426 336 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 CNGA2Q16280 664 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 SYDE2Q5VT97 1194 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 CAPRIN2Q6IMN6 1127 aaKnown RBP13.6□□□□□ -0.23
VPS52-218ENST00000482399 PPP1R18Q6NYC8 613 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 EPM2AIP1Q7L775 607 aaPredicted RBP13.6□□□□□ -0.23
VPS52-218ENST00000482399 MIER3Q7Z3K6 550 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 LXNQ9BS40 222 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 KIF9Q9HAQ2 790 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 SAYSD1Q9NPB0 183 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 SCAF8Q9UPN6 1271 aaKnown RBP13.6□□□□□ -0.23
VPS52-218ENST00000482399 NDUFB10O96000 172 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 ALDH3A1P30838 453 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 RAD23BP54727 409 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 COPS2P61201 443 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 CDC42EP5Q6NZY7 148 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
VPS52-218ENST00000482399 GPRC5CQ9NQ84 441 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 PFASO15067 1338 aa13.6□□□□□ -0.23
VPS52-218ENST00000482399 ATP2A2P16615 1042 aaKnown RBP13.59□□□□□ -0.23
VPS52-218ENST00000482399 SHMT1P34896 483 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 MSH2P43246 934 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 EAPPQ56P03 285 aaPredicted RBP13.59□□□□□ -0.23
VPS52-218ENST00000482399 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 ARHGAP27Q6ZUM4 889 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 SLC5A5Q92911 643 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 SERPINA10Q9UK55 444 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 USP20Q9Y2K6 914 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 ARL2BPQ9Y2Y0 163 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms