RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NOTUMQ6P988 496 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 C16orf59Q7L2K0 433 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 TMCO2Q7Z6W1 182 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-208ENST00000482310 MYOCDQ8IZQ8 938 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 SLC17A8Q8NDX2 589 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 APBB2Q92870 758 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 ACO2Q99798 780 aaKnown RBP14.51□□□□□ -0.09
HDAC1-208ENST00000482310 TCHPQ9BT92 498 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 APOL6Q9BWW8 343 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 EIF2AQ9BY44 585 aaKnown RBP14.51□□□□□ -0.09
HDAC1-208ENST00000482310 TRIM6Q9C030 488 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-208ENST00000482310 GZF1Q9H116 711 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-208ENST00000482310 PDZD7Q9H5P4 517 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
HDAC1-208ENST00000482310 NLRC5Q86WI3 1866 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 ANKRD63C9JTQ0 380 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 N4BP3O15049 544 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 EIF3DO15371 548 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC1-208ENST00000482310 UPP2O95045 317 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 FGBP02675 491 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 ACTN1P12814 892 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 HOXA11P31270 313 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-208ENST00000482310 PRCPP42785 496 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 ALCAMQ13740 583 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 MORC3Q14149 939 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 IKBKEQ14164 716 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 FAM187BQ17R55 369 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 SKOR2Q2VWA4 1001 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-208ENST00000482310 ZNF568Q3ZCX4 644 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 FAM117BQ6P1L5 589 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.5□□□□□ -0.095e-7■■■■■ 32.6
HDAC1-208ENST00000482310 EPM2AIP1Q7L775 607 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-208ENST00000482310 MAP4K3Q8IVH8 894 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 SPATA20Q8TB22 786 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 HVCN1Q96D96 273 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 PRIMPOLQ96LW4 560 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 UBE2OQ9C0C9 1292 aaKnown RBP14.5□□□□□ -0.09
HDAC1-208ENST00000482310 ST6GALNAC4Q9H4F1 302 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 EXOC7Q9UPT5 735 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 CTNND2Q9UQB3 1225 aa14.5□□□□□ -0.09
HDAC1-208ENST00000482310 UBE4BO95155 1302 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 SYCE3A1L190 88 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 CLIC2O15247 247 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 PFKMP08237 780 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 BMP6P22004 513 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 HOXD13P35453 343 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 OSTNP61366 133 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 DEFB103AP81534 67 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 SEZ6Q53EL9 994 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 C9orf50Q5SZB4 431 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 SLC39A4Q6P5W5 647 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 PSRC1Q6PGN9 363 aaPredicted RBP14.49□□□□□ -0.09
HDAC1-208ENST00000482310 RTN4RL1Q86UN2 441 aaPredicted RBP14.49□□□□□ -0.09
HDAC1-208ENST00000482310 LPPQ93052 612 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 ADPGKQ9BRR6 497 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 STRA6Q9BX79 667 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 PCIF1Q9H4Z3 704 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 HES2Q9Y543 173 aa14.49□□□□□ -0.09
HDAC1-208ENST00000482310 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 AXLP30530 894 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 KCNJ6P48051 423 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 WDR5P61964 334 aaKnown RBP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 DSC3Q14574 896 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 NOLC1Q14978 699 aaKnown RBP eCLIP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 DPCR1Q3MIW9 517 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 SLC27A1Q6PCB7 646 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 SASS6Q6UVJ0 657 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 MPZL3Q6UWV2 235 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 THNSL1Q8IYQ7 743 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 CEP120Q8N960 986 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 ZNF507Q8TCN5 953 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 POMGNT1Q8WZA1 660 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 RNPC3Q96LT9 517 aaKnown RBP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 GDF15Q99988 308 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 FTHL17Q9BXU8 183 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 HAPLN2Q9GZV7 340 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 CDT1Q9H211 546 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 NXF3Q9H4D5 531 aaKnown RBP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 TMEM206Q9H813 350 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 FAM105AQ9NUU6 356 aa14.48□□□□□ -0.09
HDAC1-208ENST00000482310 CXXC1Q9P0U4 656 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-208ENST00000482310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.47□□□□□ -0.09
HDAC1-208ENST00000482310 GOLGA8IPA6NC78 632 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 TRIM49BA6NDI0 452 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 GOLGA8JA6NMD2 632 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 ENPP3O14638 875 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 ABCD1P33897 745 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 CYP2J2P51589 502 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 STX17P56962 302 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 NLRP12P59046 1061 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 STIM1Q13586 685 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 PCBP1Q15365 356 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDAC1-208ENST00000482310 SHHQ15465 462 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 KNOP1Q1ED39 458 aaKnown RBP14.47□□□□□ -0.09
HDAC1-208ENST00000482310 UBXN11Q5T124 520 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
HDAC1-208ENST00000482310 RBM43Q6ZSC3 357 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms