RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 RAG1P15918 1043 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
HLA-F-225ENST00000482257 RPL13P26373 211 aaKnown RBP16.95■□□□□ 0.3
HLA-F-225ENST00000482257 CENPPQ6IPU0 288 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 TRAF7Q6Q0C0 670 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 TMEM40Q8WWA1 233 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 CCDC51Q96ER9 411 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 CHST12Q9NRB3 414 aa16.95■□□□□ 0.3
HLA-F-225ENST00000482257 N4BP3O15049 544 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 KIAA0391O15091 583 aaKnown RBP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TSPAN1O60635 241 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 CSDE1O75534 798 aaKnown RBP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TOM1L1O75674 476 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 FGFR1OPO95684 399 aaKnown RBP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TIMP1P01033 207 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 GHRP10912 638 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 HOXD13P35453 343 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 KCNA1Q09470 495 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 NFX1Q12986 1120 aaKnown RBP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 LPIN1Q14693 890 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 EDRF1Q3B7T1 1238 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 ATF7IP2Q5U623 682 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 NOTUMQ6P988 496 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 FAM228AQ86W67 206 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 ACO2Q99798 780 aaKnown RBP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 BPIFA3Q9BQP9 254 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 ADPGKQ9BRR6 497 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TARS2Q9BW92 718 aaKnown RBP16.94■□□□□ 0.3
HLA-F-225ENST00000482257 KCTD10Q9H3F6 313 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 ST3GAL5Q9UNP4 418 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TRAF3IP3Q9Y228 551 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 TNFSF13BQ9Y275 285 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 COL6A3P12111 3177 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 CDH23Q9H251 3354 aa16.94■□□□□ 0.3
HLA-F-225ENST00000482257 CLDN3O15551 220 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 ZSCAN20P17040 1043 aaPredicted RBP16.93■□□□□ 0.3
HLA-F-225ENST00000482257 ARF4P18085 180 aaPredicted RBP16.93■□□□□ 0.3
HLA-F-225ENST00000482257 GARTP22102 1010 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 CYP2C18P33260 490 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 ZNF165P49910 485 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 MYBPC2Q14324 1141 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 NFIL3Q16649 462 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 AMHR2Q16671 573 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 TPD52L1Q16890 204 aaPredicted RBP16.93■□□□□ 0.3
HLA-F-225ENST00000482257 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 TMEM199Q8N511 208 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 APBB2Q92870 758 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 FTHL17Q9BXU8 183 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 ERVK-5Q9HDB9 667 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 PADI3Q9ULW8 664 aa16.93■□□□□ 0.3
HLA-F-225ENST00000482257 PIN4Q9Y237 131 aaKnown RBP16.93■□□□□ 0.3
HLA-F-225ENST00000482257 ZMYM2Q9UBW7 1377 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 A0A1B0GUA9 196 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 SMTNL1A8MU46 457 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 FGFR4P22455 802 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 CD52P31358 61 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 CCL23P55773 120 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 FKBP3Q00688 224 aaKnown RBP16.92■□□□□ 0.3
HLA-F-225ENST00000482257 FPGSQ05932 587 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 DCAF4L1Q3SXM0 396 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 MFSD5Q6N075 450 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 ARMCX5Q6P1M9 558 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 MPZL3Q6UWV2 235 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 C11orf57Q6ZUT1 292 aaPredicted RBP16.92■□□□□ 0.3
HLA-F-225ENST00000482257 C16orf59Q7L2K0 433 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 RPUSD2Q8IZ73 545 aaKnown RBP16.92■□□□□ 0.3
HLA-F-225ENST00000482257 ENOX1Q8TC92 643 aaKnown RBP16.92■□□□□ 0.3
HLA-F-225ENST00000482257 TMEM174Q8WUU8 243 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 POMGNT1Q8WZA1 660 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 SEPT8Q92599 483 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 VWCEQ96DN2 955 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 IFIH1Q9BYX4 1025 aaKnown RBP16.92■□□□□ 0.3
HLA-F-225ENST00000482257 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 AGO3Q9H9G7 860 aaKnown RBP16.92■□□□□ 0.3
HLA-F-225ENST00000482257 AGPAT3Q9NRZ7 376 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 STYXL1Q9Y6J8 313 aa16.92■□□□□ 0.3
HLA-F-225ENST00000482257 BECN2A8MW95 431 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 CETN3O15182 167 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 B4GALT5O43286 388 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 LDHAP00338 332 aaKnown RBP16.91■□□□□ 0.3
HLA-F-225ENST00000482257 NR3C1P04150 777 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 PFKMP08237 780 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 CSF2RAP15509 400 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 STX17P56962 302 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 TPM4P67936 248 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 MYL5Q02045 173 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 MBTPS1Q14703 1052 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 KYAT1Q16773 422 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 ZNF568Q3ZCX4 644 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 ZCWPW2Q504Y3 356 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 ANKRD40Q6AI12 368 aa16.91■□□□□ 0.3
HLA-F-225ENST00000482257 SLC27A1Q6PCB7 646 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms