RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 FSCN2O14926 492 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 SLC16A4O15374 487 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 TBX10O75333 385 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 PRKCBP05771 671 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 LAG3P18627 525 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 SCNN1GP51170 649 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 COL19A1Q14993 1142 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 TIGD5Q53EQ6 642 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 PLPP4Q5VZY2 271 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 NOTUMQ6P988 496 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 GLB1LQ6UWU2 654 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 SYT2Q8N9I0 419 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 DEPTORQ8TB45 409 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 ZNF558Q96NG5 402 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 RSAD1Q9HA92 442 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 RWDD3Q9Y3V2 267 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 CNTNAP2Q9UHC6 1331 aa12.6□□□□□ -0.39
RAPGEF1-207ENST00000481260 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 MEFVO15553 781 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 HOXA2O43364 376 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 GLP2RO95838 553 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 GALTP07902 379 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 ITGA4P13612 1032 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 NAMPTP43490 491 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 NRIP1P48552 1158 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 RAB27AP51159 221 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 CEP120Q8N960 986 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 ATXN2LQ8WWM7 1075 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 MARCH5Q9NX47 278 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 CLDND1Q9NY35 253 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 SNTG2Q9NY99 539 aa12.59□□□□□ -0.39
RAPGEF1-207ENST00000481260 TRIOO75962 3097 aa12.58□□□□□ -0.39
RAPGEF1-207ENST00000481260 ACKR2O00590 384 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 IL9P15248 144 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 GUCY2CP25092 1073 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 LONP1P36776 959 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 UBA7P41226 1012 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 PRPF4BQ13523 1007 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 FAM187BQ17R55 369 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 NAALADL2Q58DX5 795 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 TAS1R1Q7RTX1 841 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZBTB8OSQ8IWT0 167 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 RAD54LQ92698 747 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 KIFAP3Q92845 792 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZBTB45Q96K62 511 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 TCF25Q9BQ70 676 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 HAPLN2Q9GZV7 340 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 CD320Q9NPF0 282 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 TLR9Q9NR96 1032 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 PRMT7Q9NVM4 692 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 CLEC1BQ9P126 229 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 ARHGAP28Q9P2N2 729 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 CDH22Q9UJ99 828 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 PRG3Q9Y2Y8 225 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZDHHC9Q9Y397 364 aa12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 SRPRBQ9Y5M8 271 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-207ENST00000481260 ABLIM1O14639 778 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 PTGESO14684 152 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 SKIP12755 728 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 AXLP30530 894 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 PLCB3Q01970 1234 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 SLC39A14Q15043 492 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 MAPK6Q16659 721 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 SEZ6Q53EL9 994 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 FAM43BQ6ZT52 329 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 COLGALT2Q8IYK4 626 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 MICAL1Q8TDZ2 1067 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 PGBD4Q96DM1 585 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 PABPC5Q96DU9 382 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 CCDC51Q96ER9 411 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 IGSF21Q96ID5 467 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 B3GALT6Q96L58 329 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 IFT74Q96LB3 600 aa12.57□□□□□ -0.4
RAPGEF1-207ENST00000481260 AK8Q96MA6 479 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms