RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 GUCY2CP25092 1073 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 AFF1P51825 1210 aaKnown RBP22.22■■□□□ 1.15
VPS36-204ENST00000480923 SLC12A3P55017 1021 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 MAPK7Q13164 816 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 DMP1Q13316 513 aaPredicted RBP22.22■■□□□ 1.15
VPS36-204ENST00000480923 KARSQ15046 597 aaKnown RBP22.22■■□□□ 1.15
VPS36-204ENST00000480923 ADGRD2Q7Z7M1 963 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 SPRYD3Q8NCJ5 442 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 PABPC5Q96DU9 382 aaKnown RBP22.22■■□□□ 1.15
VPS36-204ENST00000480923 FAM193BQ96PV7 902 aaPredicted RBP22.22■■□□□ 1.15
VPS36-204ENST00000480923 USP20Q9Y2K6 914 aa22.22■■□□□ 1.15
VPS36-204ENST00000480923 REV3LO60673 3130 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 POMCP01189 267 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 MLH1P40692 756 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 NPTX2P47972 431 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 ERVFC1P60507 584 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 DHX8Q14562 1220 aaKnown RBP22.21■■□□□ 1.15
VPS36-204ENST00000480923 ZNF280BQ86YH2 543 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 TMEM169Q96HH4 297 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 USP28Q96RU2 1077 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 GAD1Q99259 594 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 ADPGKQ9BRR6 497 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 PDZD7Q9H5P4 517 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 KMT5AQ9NQR1 393 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 PARP2Q9UGN5 583 aa22.21■■□□□ 1.15
VPS36-204ENST00000480923 FBXO2Q9UK22 296 aaPredicted RBP22.21■■□□□ 1.15
VPS36-204ENST00000480923 CARNS1A5YM72 827 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 ARL5CA6NH57 179 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 SFI1A8K8P3 1242 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 K7ERI5 159 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 BMP1P13497 986 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 PLCG1P19174 1290 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 AKAP5P24588 427 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 GTF2F1P35269 517 aaKnown RBP eCLIP22.2■■□□□ 1.14
VPS36-204ENST00000480923 SPECC1Q5M775 1068 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 FOXD4L5Q5VV16 416 aaPredicted RBP22.2■■□□□ 1.14
VPS36-204ENST00000480923 PLPP4Q5VZY2 271 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 RBM23Q86U06 439 aaKnown RBP22.2■■□□□ 1.14
VPS36-204ENST00000480923 FOXD4L4Q8WXT5 416 aaPredicted RBP22.2■■□□□ 1.14
VPS36-204ENST00000480923 C17orf75Q9HAS0 396 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 ENTPD7Q9NQZ7 604 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 KCND2Q9NZV8 630 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 DNAJB4Q9UDY4 337 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 GIT1Q9Y2X7 761 aa22.2■■□□□ 1.14
VPS36-204ENST00000480923 SRPRBQ9Y5M8 271 aaKnown RBP22.2■■□□□ 1.14
VPS36-204ENST00000480923 H3BQ06 376 aaPredicted RBP22.19■■□□□ 1.14
VPS36-204ENST00000480923 FSCN2O14926 492 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 DDHD2O94830 711 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 EDN1P05305 212 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 GALTP07902 379 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 NRIP1P48552 1158 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 SLC11A1P49279 550 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 SCNN1GP51170 649 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 LEXMQ3ZCV2 418 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 PDE12Q6L8Q7 609 aaKnown RBP22.19■■□□□ 1.14
VPS36-204ENST00000480923 TMC7Q7Z402 723 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 GPBP1Q86WP2 473 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 ADAMTS19Q8TE59 1207 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 EPSTI1Q96J88 318 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 ZFP42Q96MM3 310 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 CLIC6Q96NY7 704 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 TCF25Q9BQ70 676 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 CCSER1Q9C0I3 900 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 TLE6Q9H808 572 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 PHLPP2Q6ZVD8 1323 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 A0A0C4DFX4 3053 aa22.19■■□□□ 1.14
VPS36-204ENST00000480923 NPHP3-ACAD11A0A0J9YXS1 232 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 SLC16A4O15374 487 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 B4GALT3O60512 393 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 PDIA4P13667 645 aaKnown RBP22.18■■□□□ 1.14
VPS36-204ENST00000480923 CACNB1Q02641 598 aaPredicted RBP22.18■■□□□ 1.14
VPS36-204ENST00000480923 MCM6Q14566 821 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 COL19A1Q14993 1142 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 SLC39A14Q15043 492 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 ATF7IP2Q5U623 682 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 EEF1DP3Q658K8 133 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 TMEM173Q86WV6 379 aaPredicted RBP22.18■■□□□ 1.14
VPS36-204ENST00000480923 LRRC15Q8TF66 581 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 RAD54LQ92698 747 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 IGSF21Q96ID5 467 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 ZNF396Q96N95 335 aaPredicted RBP22.18■■□□□ 1.14
VPS36-204ENST00000480923 NGRNQ9NPE2 291 aaKnown RBP22.18■■□□□ 1.14
VPS36-204ENST00000480923 KLK14Q9P0G3 267 aa22.18■■□□□ 1.14
VPS36-204ENST00000480923 RBM19Q9Y4C8 960 aaKnown RBP22.18■■□□□ 1.14
VPS36-204ENST00000480923 PLXNA4Q9HCM2 1894 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 PER2O15055 1255 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 INPPL1O15357 1258 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 PLS3P13797 630 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 CA8P35219 290 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 TXLNAP40222 546 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 STK38Q15208 465 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 CTC1Q2NKJ3 1217 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 NT5DC1Q5TFE4 455 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 USP49Q70CQ1 688 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 RPS6KC1Q96S38 1066 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 TMEM175Q9BSA9 504 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 TMEM134Q9H6X4 195 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 BLOC1S4Q9NUP1 217 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 ARHGAP28Q9P2N2 729 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 CCDC39Q9UFE4 941 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms