RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 CNNM3Q8NE01 707 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 PRSS33Q8NF86 280 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 CCDC43Q96MW1 224 aaKnown RBP20.95■□□□□ 0.94
ABCF3-214ENST00000480562 KLHL5Q96PQ7 755 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 MTMR9Q96QG7 549 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 GAD1Q99259 594 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 APOL6Q9BWW8 343 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 TMEM60Q9H2L4 133 aa20.95■□□□□ 0.94
ABCF3-214ENST00000480562 ARL5CA6NH57 179 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 POTEMA6NI47 508 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 DGAT1O75907 488 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 CNPP09543 421 aaKnown RBP20.94■□□□□ 0.94
ABCF3-214ENST00000480562 GLRA2P23416 452 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 AXLP30530 894 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 MLH1P40692 756 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 RARRES1P49788 294 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 MRE11P49959 708 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 GUCY1B3Q02153 619 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 ATAT1Q5SQI0 421 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 KIAA1841Q6NSI8 718 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 CABP7Q86V35 215 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 CSRNP2Q9H175 543 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 UBN1Q9NPG3 1134 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 MARCH5Q9NX47 278 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 MIOSQ9NXC5 875 aa20.94■□□□□ 0.94
ABCF3-214ENST00000480562 C2CD2LO14523 706 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 B4GALT5O43286 388 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 LILRB3O75022 631 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 SEC24BO95487 1268 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 ARF4P18085 180 aaPredicted RBP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 KLRC2P26717 231 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 OR1G1P47890 313 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 SCNN1GP51170 649 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 VCPP55072 806 aaKnown RBP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 NCBP1Q09161 790 aaKnown RBP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 PCBP1Q15365 356 aaKnown RBP eCLIP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 AMHR2Q16671 573 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 MAEAQ7L5Y9 396 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 TAS1R1Q7RTX1 841 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 PPFIBP1Q86W92 1011 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 IFNLR1Q8IU57 520 aaPredicted RBP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 COLGALT2Q8IYK4 626 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 CCDC51Q96ER9 411 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 ZFP42Q96MM3 310 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 EMILIN2Q9BXX0 1053 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 POLR3FQ9H1D9 316 aaPredicted RBP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 SMOC2Q9H3U7 446 aa20.93■□□□□ 0.94
ABCF3-214ENST00000480562 DBR1Q9UK59 544 aaKnown RBP20.93■□□□□ 0.94
ABCF3-214ENST00000480562 MYO10Q9HD67 2058 aa20.92■□□□□ 0.94
ABCF3-214ENST00000480562 SPDYE4A6NLX3 237 aa20.92■□□□□ 0.94
ABCF3-214ENST00000480562 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
ABCF3-214ENST00000480562 PDGFBP01127 241 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-214ENST00000480562 ASGR2P07307 311 aa20.92■□□□□ 0.94
ABCF3-214ENST00000480562 MCM7P33993 719 aa20.92■□□□□ 0.94
ABCF3-214ENST00000480562 POU5F1BQ06416 359 aa20.92■□□□□ 0.94
ABCF3-214ENST00000480562 CDR2LQ86X02 465 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-214ENST00000480562 NXF3Q9H4D5 531 aaKnown RBP20.92■□□□□ 0.94
ABCF3-214ENST00000480562 GPRC5CQ9NQ84 441 aa20.92■□□□□ 0.94
ABCF3-214ENST00000480562 MRPL17Q9NRX2 175 aaKnown RBP20.92■□□□□ 0.94
ABCF3-214ENST00000480562 F8W810 466 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 INPPL1O15357 1258 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 BRD1O95696 1058 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 SOD2P04179 222 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 SPATA31C1P0DKV0 1188 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 CLCN4P51793 760 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 TDRD5Q8NAT2 981 aaKnown RBP20.91■□□□□ 0.94
ABCF3-214ENST00000480562 PHOX2BQ99453 314 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 HERC2P3Q9BVR0 1158 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 TRIM6Q9C030 488 aaPredicted RBP20.91■□□□□ 0.94
ABCF3-214ENST00000480562 SFXN1Q9H9B4 322 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 STK39Q9UEW8 545 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 LIMD1Q9UGP4 676 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 SORCS3Q9UPU3 1222 aa20.91■□□□□ 0.94
ABCF3-214ENST00000480562 NPTXRO95502 500 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 URODP06132 367 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 AKAP5P24588 427 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 DSC1Q08554 894 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 MTMR3Q13615 1198 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 GPR149Q86SP6 731 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 CATSPER3Q86XQ3 398 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 NFKBIZQ9BYH8 718 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 KMT2EQ8IZD2 1858 aa20.9■□□□□ 0.94
ABCF3-214ENST00000480562 LRRIQ4A6NIV6 560 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 MED24O75448 989 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 MYBP10242 640 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 XRCC6P12956 609 aaKnown RBP eCLIP20.89■□□□□ 0.93
ABCF3-214ENST00000480562 AVPR2P30518 371 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 SAFBQ15424 915 aaKnown RBP eCLIP20.89■□□□□ 0.93
ABCF3-214ENST00000480562 CCDC83Q8IWF9 413 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 UBALD2Q8IYN6 164 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 ZDHHC14Q8IZN3 488 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 RPS6KC1Q96S38 1066 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 KLK14Q9P0G3 267 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 GIT1Q9Y2X7 761 aa20.89■□□□□ 0.93
ABCF3-214ENST00000480562 TEX28O15482 410 aa20.88■□□□□ 0.93
ABCF3-214ENST00000480562 GLUD2P49448 558 aa20.88■□□□□ 0.93
ABCF3-214ENST00000480562 PTPN5P54829 565 aa20.88■□□□□ 0.93
ABCF3-214ENST00000480562 TCF15Q12870 199 aa20.88■□□□□ 0.93
ABCF3-214ENST00000480562 ZNF174Q15697 407 aa20.88■□□□□ 0.93
ABCF3-214ENST00000480562 HACE1Q8IYU2 909 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms