RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 H3BRB1 525 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 ADRB2P07550 413 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 TRIM49P0CI25 452 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 TRIM49CP0CI26 452 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 ZNF865P0CJ78 1059 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-204ENST00000480057 INSRRP14616 1297 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 FERP16591 822 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 TMOD1P28289 359 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 STAT1P42224 750 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 MXI1P50539 228 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 VAV2P52735 878 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 PPP3CAQ08209 521 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 NOGQ13253 232 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 GRM1Q13255 1194 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 CRHR2Q13324 411 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 PSMD6Q15008 389 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 MAPK6Q16659 721 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 CBWD6Q4V339 395 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 EPC2Q52LR7 807 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 ARHGAP29Q52LW3 1261 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 CBWD3Q5JTY5 395 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 CBWD5Q5RIA9 395 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 C10orf76Q5T2E6 689 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 TMEM63BQ5T3F8 832 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 EFCAB12Q6NXP0 572 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 CBWD2Q8IUF1 395 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 RDH13Q8NBN7 331 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 LMO3Q8TAP4 145 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 PARD3BQ8TEW8 1205 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 FAM81BQ96LP2 452 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 RNPEPQ9H4A4 650 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 DEF6Q9H4E7 631 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 TUT1Q9H6E5 874 aaKnown RBP11.97□□□□□ -0.49
VTI1A-204ENST00000480057 APEX2Q9UBZ4 518 aa11.97□□□□□ -0.49
VTI1A-204ENST00000480057 AGO2Q9UKV8 859 aaKnown RBP11.97□□□□□ -0.49
VTI1A-204ENST00000480057 REXO2Q9Y3B8 237 aaKnown RBP11.97□□□□□ -0.49
VTI1A-204ENST00000480057 MGAMO43451 1857 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 KRT86O43790 486 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 MSCO60682 206 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 ZC3H11AO75152 810 aaKnown RBP eCLIP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 TOM1L1O75674 476 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 TOMM70O94826 608 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 ACTN1P12814 892 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 EIF4A3P38919 411 aaKnown RBP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 ARHGAP25P42331 645 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 KIF11P52732 1056 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 AP3M2P53677 418 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 FCGRTP55899 365 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 PTENP60484 403 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 CDC42EP1Q00587 391 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 KLHL30Q0D2K2 578 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 RAPGEF1Q13905 1077 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 FAM187BQ17R55 369 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 KRT39Q6A163 491 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 IQCEQ6IPM2 695 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 SYT10Q6XYQ8 523 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 MYRIPQ8NFW9 859 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 PLEKHO2Q8TD55 490 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 TMEM117Q9H0C3 514 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 FZD8Q9H461 694 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-204ENST00000480057 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.49
VTI1A-204ENST00000480057 GOLGA8IPA6NC78 632 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 GOLGA8JA6NMD2 632 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 LRRIQ3A6PVS8 624 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-204ENST00000480057 ACKR2O00590 384 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 PJA2O43164 708 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 AKR1B10O60218 316 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 F2P00734 622 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 PRKCBP05771 671 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 KLRC1P26715 233 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 CASQ1P31415 396 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 PHKA2P46019 1235 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 GCLMP48507 274 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 CPT1AP50416 773 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 GPC3P51654 580 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 GNG11P61952 73 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 DLG4P78352 724 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 MCL1Q07820 350 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 DRP2Q13474 957 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 SURF1Q15526 300 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 TDRD12Q587J7 1177 aaKnown RBP11.95□□□□□ -0.5
VTI1A-204ENST00000480057 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 C15orf39Q6ZRI6 1047 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 IRF2BP2Q7Z5L9 587 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 KIAA1328Q86T90 577 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF710Q8N1W2 664 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 SAAL1Q96ER3 474 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 FAM213AQ9BRX8 229 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms