RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 DAXXQ9UER7 740 aaPredicted RBP17.45■□□□□ 0.38
HDLBP-238ENST00000479894 ZFP37Q9Y6Q3 630 aaPredicted RBP17.45■□□□□ 0.38
HDLBP-238ENST00000479894 DDX39AO00148 427 aaKnown RBP17.44■□□□□ 0.38
HDLBP-238ENST00000479894 DHX15O43143 795 aaKnown RBP17.44■□□□□ 0.38
HDLBP-238ENST00000479894 SLC11A1P49279 550 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 NAPAP54920 295 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 PRKCQQ04759 706 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 RNASELQ05823 741 aaKnown RBP17.44■□□□□ 0.38
HDLBP-238ENST00000479894 RSPO2Q6UXX9 243 aaPredicted RBP17.44■□□□□ 0.38
HDLBP-238ENST00000479894 NSUN7Q8NE18 718 aaKnown RBP17.44■□□□□ 0.38
HDLBP-238ENST00000479894 SMG7Q92540 1137 aaKnown RBP17.44■□□□□ 0.38
HDLBP-238ENST00000479894 FAM167AQ96KS9 214 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 USP18Q9UMW8 372 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 SMC3Q9UQE7 1217 aa17.44■□□□□ 0.38
HDLBP-238ENST00000479894 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 ZNF623O75123 536 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 LRRN2O75325 713 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 OFD1O75665 1012 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 LARGE1O95461 756 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 PDCP20941 246 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 CDC42EP1Q00587 391 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 CSTF1Q05048 431 aaKnown RBP17.43■□□□□ 0.38
HDLBP-238ENST00000479894 CUL4AQ13619 759 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 ZNF746Q6NUN9 644 aaPredicted RBP17.43■□□□□ 0.38
HDLBP-238ENST00000479894 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
HDLBP-238ENST00000479894 RPS6KC1Q96S38 1066 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 TMEM175Q9BSA9 504 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 ANO3Q9BYT9 981 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 DNAJB4Q9UDY4 337 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 GMEB2Q9UKD1 530 aa17.43■□□□□ 0.38
HDLBP-238ENST00000479894 GLUD1P00367 558 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 SOD2P04179 222 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 URODP06132 367 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 SREBF1P36956 1147 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 RAB27AP51159 221 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 PPM1JQ5JR12 505 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 NETO1Q8TDF5 533 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 FAM126AQ9BYI3 521 aaPredicted RBP17.42■□□□□ 0.38
HDLBP-238ENST00000479894 PLEKHA4Q9H4M7 779 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 ZDHHC7Q9NXF8 308 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 NUMBLQ9Y6R0 609 aa17.42■□□□□ 0.38
HDLBP-238ENST00000479894 TDRD15B5MCY1 1934 aaKnown RBP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 SLC30A4O14863 429 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 CD2BP2O95400 341 aaKnown RBP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 ALDH2P05091 517 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 SSBP05455 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 PSAPP07602 524 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 FGFR4P22455 802 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 ZNF76P36508 570 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 ADCY7P51828 1080 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 MLF2Q15773 248 aaPredicted RBP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 WWC2Q6AWC2 1192 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 LRRC71Q8N4P6 559 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 NLRP7Q8WX94 980 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 LPPQ93052 612 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 ZNF707Q96C28 371 aaPredicted RBP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 HERC2P3Q9BVR0 1158 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 GCOM2Q9BZD3 368 aaPredicted RBP17.41■□□□□ 0.38
HDLBP-238ENST00000479894 RXFP1Q9HBX9 757 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 FAM105AQ9NUU6 356 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 INPP5FQ9Y2H2 1132 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 PCDHA10Q9Y5I2 948 aa17.41■□□□□ 0.38
HDLBP-238ENST00000479894 SMCO2A6NFE2 343 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 IPO5O00410 1097 aaKnown RBP17.4■□□□□ 0.38
HDLBP-238ENST00000479894 TEX28O15482 410 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 LRP3O75074 770 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 RFPL2O75678 378 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 CTDNEP1O95476 244 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 SFPQP23246 707 aaKnown RBP eCLIP17.4■□□□□ 0.38
HDLBP-238ENST00000479894 NLRP5P59047 1200 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 GPC5P78333 572 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 PLA2G4DQ86XP0 818 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 ZNF280BQ86YH2 543 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 URGCPQ8TCY9 931 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 PGBD4Q96DM1 585 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 PIDD1Q9HB75 910 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 PARD6AQ9NPB6 346 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 KANSL3Q9P2N6 904 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 FAN1Q9Y2M0 1017 aa17.4■□□□□ 0.38
HDLBP-238ENST00000479894 hCG_1642624A0A1W2PR95 340 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 B4GALT3O60512 393 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 PFKPQ01813 784 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 SNW1Q13573 536 aaKnown RBP17.39■□□□□ 0.37
HDLBP-238ENST00000479894 GET4Q7L5D6 327 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-238ENST00000479894 RNF168Q8IYW5 571 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-238ENST00000479894 CLDN23Q96B33 292 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 PGBD1Q96JS3 809 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 C8orf76Q96K31 380 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 ZNF668Q96K58 619 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-238ENST00000479894 PRKD2Q9BZL6 878 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms