RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 RTP1P59025 263 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 GPS2Q13227 327 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 NT5DC3Q86UY8 548 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 RFFLQ8WZ73 363 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 RUBCNQ92622 972 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 KREMEN1Q96MU8 473 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 THAP2Q9H0W7 228 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 PLEKHA4Q9H4M7 779 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 ADARB2Q9NS39 739 aaKnown RBP14.08□□□□□ -0.16
SEC13-216ENST00000479868 ARHGAP28Q9P2N2 729 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 HPCAL4Q9UM19 191 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
SEC13-216ENST00000479868 CSADQ9Y600 493 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 CES2O00748 559 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 IRF6O14896 467 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 ATG7O95352 703 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 USP8P40818 1118 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 EMC2Q15006 297 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 KRT39Q6A163 491 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 GADL1Q6ZQY3 521 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 PPM1KQ8N3J5 372 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 CTNNBL1Q8WYA6 563 aaPredicted RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 ELMO3Q96BJ8 720 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 MFSD14AQ96MC6 490 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 R3HDMLQ9H3Y0 253 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 VIPAS39Q9H9C1 493 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 ZNF302Q9NR11 478 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 USP20Q9Y2K6 914 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 ZC3H4Q9UPT8 1303 aaKnown RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 BUB1BO60566 1050 aaPredicted RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 GLI1P08151 1106 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 CYP24A1Q07973 514 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 BRDTQ58F21 947 aaPredicted RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 ZNF771Q7L3S4 317 aaPredicted RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 SULF1Q8IWU6 871 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 CCDC102AQ96A19 550 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 TMEM143Q96AN5 459 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 DCPSQ96C86 337 aaKnown RBP14.07□□□□□ -0.16
SEC13-216ENST00000479868 BICD1Q96G01 975 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 FAM84AQ96KN4 292 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 IFT74Q96LB3 600 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 KRT12Q99456 494 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 ELP3Q9H9T3 547 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 TMEM8AQ9HCN3 771 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 TMEM59LQ9UK28 342 aa14.07□□□□□ -0.16
SEC13-216ENST00000479868 ZSCAN5CA6NGD5 496 aaPredicted RBP14.06□□□□□ -0.16
SEC13-216ENST00000479868 CEP104O60308 925 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 SGPL1O95470 568 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 OATP04181 439 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
SEC13-216ENST00000479868 PPATQ06203 517 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 NCAPG2Q86XI2 1143 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 FAM71AQ8IYT1 594 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
SEC13-216ENST00000479868 SYCE1Q8N0S2 351 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 GPD1LQ8N335 351 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 TMC2Q8TDI7 906 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 TAS1R2Q8TE23 839 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 CLMNQ96JQ2 1002 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 PBKQ96KB5 322 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 SPATC1LQ9H0A9 340 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
SEC13-216ENST00000479868 COG5Q9UP83 839 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
SEC13-216ENST00000479868 ANKRD62A6NC57 917 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 DLATP10515 647 aaKnown RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 HELQQ8TDG4 1101 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 EPS8L1Q8TE68 723 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 VTI1AQ96AJ9 217 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 HES6Q96HZ4 224 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 PAGR1Q9BTK6 254 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 NOCTQ9UK39 431 aaKnown RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 ESYT3A0FGR9 886 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 CYP26A1O43174 497 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 PHACTR2O75167 634 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 FARP2O94887 1054 aaPredicted RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 HEXIM1O94992 359 aaKnown RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 GARTP22102 1010 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 GPC3P51654 580 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 MOB2Q70IA6 237 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 SV2AQ7L0J3 742 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 NOP9Q86U38 636 aaKnown RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 SLC47A2Q86VL8 602 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 FBXL13Q8NEE6 735 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 ACTRT1Q8TDG2 376 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 ASAP3Q8TDY4 903 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 SHC3Q92529 594 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 PCDHB18PQ96TA0 734 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 PCYT2Q99447 389 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms