RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 POFUT1Q9H488 388 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 DNAJC28Q9NX36 388 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 CCDC88AQ3V6T2 1871 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 CA12O43570 354 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 MAP4K4O95819 1239 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 CLEC2LP0C7M8 214 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 U2AF1L5P0DN76 240 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 KCNA3P22001 575 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 MANFP55145 182 aaKnown RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 U2AF1Q01081 240 aaKnown RBP eCLIP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 TMEM62Q0P6H9 643 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 MOGSQ13724 837 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 SAFB2Q14151 953 aaKnown RBP eCLIP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 GFOD2Q3B7J2 385 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 PLEKHN1Q494U1 663 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 CIAPIN1Q6FI81 312 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 TIGD7Q6NT04 549 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 ZC3H14Q6PJT7 736 aaKnown RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 CCAR1Q8IX12 1150 aaKnown RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 FAM126BQ8IXS8 530 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 CMTR2Q8IYT2 770 aaKnown RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 HSPBAP1Q96EW2 488 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 TOE1Q96GM8 510 aaKnown RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 QRSL1Q9H0R6 528 aaKnown RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 SLC6A17Q9H1V8 727 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 BCAS3Q9H6U6 928 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 ARHGAP28Q9P2N2 729 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 PNMA8BQ9ULN7 279 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-205ENST00000479712 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 TOGARAM1Q9Y4F4 1720 aa6.79□□□□□ -1.32
UPF3A-205ENST00000479712 VCANP13611 3396 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 ABCC6O95255 1503 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 OR14I1A6ND48 311 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 APOL3O95236 402 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 IL33O95760 270 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 MMP10P09238 476 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 MC4RP32245 332 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 PDE6BP35913 854 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
UPF3A-205ENST00000479712 UGT8Q16880 541 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
UPF3A-205ENST00000479712 CT83Q5H943 113 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 TOR2AQ5JU69 321 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 ZBTB41Q5SVQ8 909 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 PRAMEF18Q5VWM3 479 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 PRAMEF9Q5VWM5 478 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 CD276Q5ZPR3 534 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 CCSAPQ6IQ19 270 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-205ENST00000479712 CCDC62Q6P9F0 684 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 ETV3LQ6ZN32 361 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 LDHDQ86WU2 507 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 ALG3Q92685 438 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 TEKT5Q96M29 485 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 MYL10Q9BUA6 226 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 BTBD7Q9P203 1132 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 KLHL14Q9P2G3 628 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 EDARQ9UNE0 448 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 CPDO75976 1380 aa6.78□□□□□ -1.32
UPF3A-205ENST00000479712 C5P01031 1676 aa6.77□□□□□ -1.32
UPF3A-205ENST00000479712 KDM6AO15550 1401 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 ST20-MTHFSA0A0A6YYL1 179 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 ELL2O00472 640 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 HYAL3O43820 417 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 CAND2O75155 1236 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 PRPF6O94906 941 aaKnown RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 PRLP01236 227 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 LRG1P02750 347 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 VCAM1P19320 739 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 CYP2C19P33261 490 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 SLC6A3Q01959 620 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 ROM1Q03395 351 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 LRP8Q14114 963 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 FYB2Q5VWT5 728 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 TEPPQ6URK8 271 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 ABI1Q8IZP0 508 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 NGDNQ8NEJ9 315 aaKnown RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 SSH1Q8WYL5 1049 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 EAF2Q96CJ1 260 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 DDX11Q96FC9 970 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 NUP88Q99567 741 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-205ENST00000479712 FOXB1Q99853 325 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 UCKL1Q9NWZ5 548 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 GPR45Q9Y5Y3 372 aa6.77□□□□□ -1.33
UPF3A-205ENST00000479712 PRSS38A1L453 326 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 H0YGN5 161 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 ABLIM1O14639 778 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 DDNO94850 711 aaPredicted RBP6.76□□□□□ -1.33
UPF3A-205ENST00000479712 OSMP13725 252 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 AGXTP21549 392 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 PTGS1P23219 599 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 STAT5AP42229 794 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 ALDH6A1Q02252 535 aaKnown RBP6.76□□□□□ -1.33
UPF3A-205ENST00000479712 MYBPC3Q14896 1274 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 PITRM1Q5JRX3 1037 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 TMEM132EQ6IEE7 984 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 SLFN12LQ6IEE8 588 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms