RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PDXKO00764 312 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 SATB1Q01826 763 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 OTUD6AQ7L8S5 288 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 KIF2BQ8N4N8 673 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 RDH13Q8NBN7 331 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 GPR88Q9GZN0 384 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 MLXIPLQ9NP71 852 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 SERPINA10Q9UK55 444 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 CCDC169A6NNP5 214 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TISP43B9A030 160 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TBX3O15119 743 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 EYA4O95677 639 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 RARAP10276 462 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 VCAM1P19320 739 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 PTGIRP43119 386 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 C1orf186Q6ZWK4 172 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 BORCS6Q96GS4 357 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 FIZ1Q96SL8 496 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 MRIQ9BWK5 157 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 CARD9Q9H257 536 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 SEPT11Q9NVA2 429 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 INTUQ9ULD6 942 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TCRBV7S2A1N4TA0A589 114 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 DDX39AO00148 427 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 HGSO14964 777 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TBCAO75347 108 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TRIM49P0CI25 452 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TRIM49CP0CI26 452 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 STAT1P42224 750 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 ALDH5A1P51649 535 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 NCALDP61601 193 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 DRAP1Q14919 205 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 PPP2R5AQ15172 486 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 BTNL9Q6UXG8 535 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 PRELID2Q8N945 189 aa14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 TYW1Q9NV66 732 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-208ENST00000479530 COL11A2P13942 1736 aaPredicted RBP14.33□□□□□ -0.11
PDZRN3-208ENST00000479530 SNX3O60493 162 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 PSMD10O75832 226 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 RAD17O75943 681 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 GSTA1P08263 222 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 TMEM253P0C7T8 217 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 SOX5P35711 763 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CYP2J2P51589 502 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 AUHQ13825 339 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 LLGL1Q15334 1064 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CNGA2Q16280 664 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CBWD6Q4V339 395 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CBWD3Q5JTY5 395 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 SPDYCQ5MJ68 293 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CBWD5Q5RIA9 395 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CPNE8Q86YQ8 564 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CTNNBL1Q8WYA6 563 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 POLR3CQ9BUI4 534 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 FGFR1OP2Q9NVK5 253 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 NCANO14594 1321 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 A0A1B0GUA9 196 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 H0YIN7 160 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 CALUO43852 315 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 FERP16591 822 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 TBC1D10BQ4KMP7 808 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 DNAJC12Q9UKB3 198 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 PNMA3Q9UL41 463 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 TRIM33Q9UPN9 1127 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 PTPN22Q9Y2R2 807 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 C15orf41Q9Y2V0 281 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 PCDHA3Q9Y5H8 950 aa14.33□□□□□ -0.12
PDZRN3-208ENST00000479530 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 TULP1O00294 542 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 STAT2P52630 851 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 DGKZQ13574 1117 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 ZNF268Q14587 947 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 EXOC3L1Q86VI1 746 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 ZSWIM2Q8NEG5 633 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 L3MBTL3Q96JM7 780 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 ZNF570Q96NI8 536 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 ALG6Q9Y672 507 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 TMEM110-MUSTN1A8MSY1 372 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 IGF2BP3O00425 579 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 RIPK2O43353 540 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 FAM13AO94988 1023 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 AGTP01019 485 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 CYP3A4P08684 503 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 NQO1P15559 274 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 ARHGAP44Q17R89 818 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 BMT2Q1RMZ1 405 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 C7orf43Q8WVR3 580 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 POP1Q99575 1024 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
PDZRN3-208ENST00000479530 ECT2Q9H8V3 914 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms