RNA–Protein interactions for RNA: ENST00000478670.5

BUD23-216, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 4

Gene BUD23, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-216ENST00000478670 SV2BQ7L1I2 683 aa20.59■□□□□ 0.89
BUD23-216ENST00000478670 MRPL38Q96DV4 380 aaKnown RBP20.59■□□□□ 0.89
BUD23-216ENST00000478670 NTPCRQ9BSD7 190 aaKnown RBP20.59■□□□□ 0.89
BUD23-216ENST00000478670 EIF2AQ9BY44 585 aaKnown RBP20.59■□□□□ 0.89
BUD23-216ENST00000478670 MRPL4Q9BYD3 311 aaKnown RBP20.59■□□□□ 0.89
BUD23-216ENST00000478670 PARVGQ9HBI0 331 aa20.59■□□□□ 0.89
BUD23-216ENST00000478670 KANSL3Q9P2N6 904 aa20.59■□□□□ 0.89
BUD23-216ENST00000478670 INPP5FQ9Y2H2 1132 aa20.59■□□□□ 0.89
BUD23-216ENST00000478670 SFI1A8K8P3 1242 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 SLC16A4O15374 487 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 NUCB2P80303 420 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 CACNB1Q02641 598 aaPredicted RBP20.58■□□□□ 0.89
BUD23-216ENST00000478670 DCAF4L1Q3SXM0 396 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 ARSHQ5FYA8 562 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 ATF7IP2Q5U623 682 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 THNSL1Q8IYQ7 743 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 COLGALT1Q8NBJ5 622 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 SLC17A8Q8NDX2 589 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 PPM1EQ8WY54 764 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 ZNF558Q96NG5 402 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 CUEDC2Q9H467 287 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 ZHX3Q9H4I2 956 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 PDZD7Q9H5P4 517 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 FAM13BQ9NYF5 915 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 CHD7Q9P2D1 2997 aa20.58■□□□□ 0.89
BUD23-216ENST00000478670 PRRC2BQ5JSZ5 2229 aaKnown RBP20.58■□□□□ 0.88
BUD23-216ENST00000478670 ZMYM2Q9UBW7 1377 aa20.58■□□□□ 0.88
BUD23-216ENST00000478670 NPHP3-ACAD11A0A0J9YXS1 232 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 OFD1O75665 1012 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 GIT2Q14161 759 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 CCDC85BQ15834 202 aaPredicted RBP20.57■□□□□ 0.88
BUD23-216ENST00000478670 AGMOQ6ZNB7 445 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 MYCT1Q8N699 235 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 PDILTQ8N807 584 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 KLHL23Q8NBE8 558 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 SMG8Q8ND04 991 aaKnown RBP20.57■□□□□ 0.88
BUD23-216ENST00000478670 LRRC15Q8TF66 581 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 SPATA32Q96LK8 384 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 FAM193BQ96PV7 902 aaPredicted RBP20.57■□□□□ 0.88
BUD23-216ENST00000478670 PYM1Q9BRP8 204 aaKnown RBP20.57■□□□□ 0.88
BUD23-216ENST00000478670 LRRC27Q9C0I9 530 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 CWH43Q9H720 699 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 GIT1Q9Y2X7 761 aa20.57■□□□□ 0.88
BUD23-216ENST00000478670 ALDH7A1P49419 539 aaKnown RBP20.56■□□□□ 0.88
BUD23-216ENST00000478670 ZNF131P52739 623 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 UBE3AQ05086 875 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 SKIV2LQ15477 1246 aaKnown RBP20.56■□□□□ 0.88
BUD23-216ENST00000478670 CDR2LQ86X02 465 aaPredicted RBP20.56■□□□□ 0.88
BUD23-216ENST00000478670 APOL6Q9BWW8 343 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 PANK2Q9BZ23 570 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 SCAND2PQ9GZW5 306 aaPredicted RBP20.56■□□□□ 0.88
BUD23-216ENST00000478670 NXF3Q9H4D5 531 aaKnown RBP20.56■□□□□ 0.88
BUD23-216ENST00000478670 TBC1D13Q9NVG8 400 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 RCOR1Q9UKL0 485 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 PCDHA7Q9UN72 937 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 PLAGL2Q9UPG8 496 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
BUD23-216ENST00000478670 ATG2AQ2TAZ0 1938 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 MEIS3P2A8K0S8 358 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 K7ENM7 598 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 ZC3H11AO75152 810 aaKnown RBP eCLIP20.55■□□□□ 0.88
BUD23-216ENST00000478670 NCKAP1LP55160 1127 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 KRT17Q04695 432 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 KCNT2Q6UVM3 1135 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 LRRC55Q6ZSA7 311 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 FAM178BQ8IXR5 827 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 IQUBQ8NA54 791 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 TMEM161BQ8NDZ6 487 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 PPP2R3CQ969Q6 453 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 RPS6KC1Q96S38 1066 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 TNMDQ9H2S6 317 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 ALG13Q9NP73 1137 aaKnown RBP20.55■□□□□ 0.88
BUD23-216ENST00000478670 PARP2Q9UGN5 583 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 PUF60Q9UHX1 559 aaKnown RBP20.55■□□□□ 0.88
BUD23-216ENST00000478670 TNFSF13BQ9Y275 285 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 HES2Q9Y543 173 aa20.55■□□□□ 0.88
BUD23-216ENST00000478670 TRANK1O15050 2925 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 GRM6O15303 877 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 TRAK2O60296 914 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 FGF18O76093 207 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 ITGB1P05556 798 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 MAPTP10636 758 aaKnown RBP20.54■□□□□ 0.88
BUD23-216ENST00000478670 MLH1P40692 756 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 AMPD3Q01432 767 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 ZNF568Q3ZCX4 644 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 AXDND1Q5T1B0 1012 aaPredicted RBP20.54■□□□□ 0.88
BUD23-216ENST00000478670 SHC4Q6S5L8 630 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 DYMQ7RTS9 669 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 DDX12PQ92771 950 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 NSUN3Q9H649 340 aaKnown RBP20.54■□□□□ 0.88
BUD23-216ENST00000478670 MAGEF1Q9HAY2 307 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 SPG21Q9NZD8 308 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 HCSTQ9UBK5 93 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 SEL1LQ9UBV2 794 aa20.54■□□□□ 0.88
BUD23-216ENST00000478670 ARL5CA6NH57 179 aa20.53■□□□□ 0.88
BUD23-216ENST00000478670 INPPL1O15357 1258 aa20.53■□□□□ 0.88
BUD23-216ENST00000478670 GAP43P17677 238 aa20.53■□□□□ 0.88
BUD23-216ENST00000478670 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
BUD23-216ENST00000478670 BCAR1P56945 870 aa20.53■□□□□ 0.88
BUD23-216ENST00000478670 NT5DC1Q5TFE4 455 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms