RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PCSK4Q6UW60 755 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 Q6ZPA2 131 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 ZNF575Q86XF7 245 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 MDGA1Q8NFP4 955 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 CPT1CQ8TCG5 803 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 USP7Q93009 1102 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 FAM193BQ96PV7 902 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 HAPLN2Q9GZV7 340 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 OXSMQ9NWU1 459 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 ING3Q9NXR8 418 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 SORCS3Q9UPU3 1222 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 APOBEC2Q9Y235 224 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 SPO11Q9Y5K1 396 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 A0A0A6YYJ9 748 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 ZNF891A8MT65 544 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 PCDH8O95206 1070 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 MAN2A1Q16706 1144 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 BRDTQ58F21 947 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 SPATS2Q86XZ4 545 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 WDR66Q8TBY9 1149 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 HIST1H2AHQ96KK5 128 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 HIST1H2AJQ99878 128 aa5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 THOC2Q8NI27 1593 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-212ENST00000478573 NEMP1O14524 444 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 GAS7O60861 476 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 FSBPO95073 299 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 BMP5P22003 454 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 ADCYAP1R1P41586 468 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 LSSP48449 732 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 EVA1CP58658 441 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 OCRLQ01968 901 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 CREB3L3Q68CJ9 461 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 KCNV1Q6PIU1 500 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 KANSL1Q7Z3B3 1105 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 VRK3Q8IV63 474 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 FERMT2Q96AC1 680 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 CPPED1Q9BRF8 314 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 MLST8Q9BVC4 326 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 PUS7LQ9H0K6 701 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 KLHL42Q9P2K6 505 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 TRPS1Q9UHF7 1281 aa5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 TOP2AP11388 1531 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-212ENST00000478573 A0A0A6YYK5 440 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 ST20-MTHFSA0A0A6YYL1 179 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 NRP1O14786 923 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 SCAF4O95104 1147 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 ABHD16AO95870 558 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 S100BP04271 92 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 GAAP10253 952 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 ATP2A2P16615 1042 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 GUCY2FP51841 1108 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 SART3Q15020 963 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 PTPAQ15257 358 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 MBNL2Q5VZF2 373 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 LHFPL2Q6ZUX7 228 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 APBB1IPQ7Z5R6 666 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 NXPE1Q8N323 547 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 OR5M3Q8NGP4 307 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 SOX7Q9BT81 388 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 OSBPL6Q9BZF3 934 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 EIF2B4Q9UI10 523 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 USP18Q9UMW8 372 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 WASHC2CQ9Y4E1 1318 aa5.47□□□□□ -1.53
CDC42BPA-212ENST00000478573 MTSS1O43312 755 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 RECQL4O94761 1208 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 ALDH1A2O94788 518 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 FKBP9O95302 570 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 NR4A1P22736 598 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 CD40P25942 277 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 CASRP41180 1078 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 DCAF17Q5H9S7 520 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 LY6G5CQ5SRR4 150 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 DPY19L2P1Q6NXN4 242 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 FKBP9P1Q75LS8 142 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 PIK3C3Q8NEB9 887 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 ZMAT4Q9H898 229 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 THG1LQ9NWX6 298 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 MYPNQ86TC9 1320 aa5.46□□□□□ -1.54
CDC42BPA-212ENST00000478573 CUX2O14529 1486 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 PCSK5Q92824 1860 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 GRXCR1A8MXD5 290 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 K7ESF4 209 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 HOXA3O43365 443 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 CFBP00751 764 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 GCP02774 474 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 ITGB1P05556 798 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 GYPEP15421 78 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 ID4P47928 161 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 IL2P60568 153 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 CD69Q07108 199 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 TIGD2Q4W5G0 525 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 ODR4Q5SWX8 454 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms