RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 USO1O60763 962 aaKnown RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 POMCP01189 267 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 ADH1AP07327 375 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 KLRC2P26717 231 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 MCM7P33993 719 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 FOSBP53539 338 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 CAPSQ13938 189 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 PTPN14Q15678 1187 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 UBXN11Q5T124 520 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 RARS2Q5T160 578 aaKnown RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 SLC27A1Q6PCB7 646 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 TMEM173Q86WV6 379 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 FAM184AQ8NB25 1140 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 ZSCAN31Q96LW9 406 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 MTMR9Q96QG7 549 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 NACC1Q96RE7 527 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 C2orf40Q9H1Z8 148 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 PRMT7Q9NVM4 692 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 ARL5CA6NH57 179 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 SOD2P04179 222 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 MUTP22033 750 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 ARL2P36404 184 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 OR1G1P47890 313 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 RBM25P49756 843 aaKnown RBP16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 CREMQ03060 361 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 MBTD1Q05BQ5 628 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 APBB1IPQ7Z5R6 666 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 ZNF280BQ86YH2 543 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 FBXL6Q8N531 539 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 FBXL18Q96ME1 805 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 RPS6KC1Q96S38 1066 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 HERC2P3Q9BVR0 1158 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 COLEC11Q9BWP8 271 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 RAB34Q9BZG1 259 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 IRF2BPLQ9H1B7 796 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 FOXP1Q9H334 677 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 SH2B1Q9NRF2 756 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 SORCS3Q9UPU3 1222 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 USTQ9Y2C2 406 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
SMARCE1-209ENST00000478349 POTEMA6NI47 508 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 NRP1O14786 923 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 ZBTB39O15060 712 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 OR52Z1P0C646 297 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 ATP2B1P20020 1258 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 MLH1P40692 756 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 GLUD2P49448 558 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 PTPN5P54829 565 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 CCDC149Q6ZUS6 474 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 SMG8Q8ND04 991 aaKnown RBP16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 ASAP3Q8TDY4 903 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 PIGOQ8TEQ8 1089 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 AUTS2Q8WXX7 1259 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 POLR3CQ9BUI4 534 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 POMKQ9H5K3 350 aa16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 PRG3Q9Y2Y8 225 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-209ENST00000478349 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 DDHD2O94830 711 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 SSBP05455 408 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCE1-209ENST00000478349 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
SMARCE1-209ENST00000478349 EPCAMP16422 314 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 ARF4P18085 180 aaPredicted RBP16■□□□□ 0.15
SMARCE1-209ENST00000478349 GLRA2P23416 452 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 SP100P23497 879 aaPredicted RBP16■□□□□ 0.15
SMARCE1-209ENST00000478349 GRIK3Q13003 919 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 CYP26C1Q6V0L0 522 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 C15orf39Q6ZRI6 1047 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 OTOP3Q7RTS5 596 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 CCDC83Q8IWF9 413 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 ZDHHC14Q8IZN3 488 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 SLC22A17Q8WUG5 538 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
SMARCE1-209ENST00000478349 CPB2Q96IY4 423 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 GAD1Q99259 594 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 APOL6Q9BWW8 343 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 EIF2AQ9BY44 585 aaKnown RBP16■□□□□ 0.15
SMARCE1-209ENST00000478349 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCE1-209ENST00000478349 WDR81Q562E7 1941 aa16■□□□□ 0.15
SMARCE1-209ENST00000478349 MUC6Q6W4X9 2439 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 N4BP3O15049 544 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 DTNBO60941 627 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 GLUD1P00367 558 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 C1RP00736 705 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 RPA1P27694 616 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 SCNN1GP51170 649 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 CLCN4P51793 760 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 NUBP1P53384 320 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms