RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RHBDL2Q9NX52 303 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 ATXN10Q9UBB4 475 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 PHTF1Q9UMS5 762 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 PCDHA2Q9Y5H9 948 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 ALAS1P13196 640 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 MARSP56192 900 aaKnown RBP10.54□□□□□ -0.72
COL13A1-207ENST00000478219 JAM2P57087 298 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 OCRLQ01968 901 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 CCDC152Q4G0S7 254 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 CABLES1Q8TDN4 633 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 CDK5RAP3Q96JB5 506 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 SERPINB12Q96P63 405 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 MTMR9Q96QG7 549 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 ROPN1BQ9BZX4 212 aaPredicted RBP10.54□□□□□ -0.72
COL13A1-207ENST00000478219 ROPN1Q9HAT0 212 aaPredicted RBP10.54□□□□□ -0.72
COL13A1-207ENST00000478219 RASAL2Q9UJF2 1139 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 MAGEA13PA6NCF6 341 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 TMEM110-MUSTN1A8MSY1 372 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 CETN3O15182 167 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 LYNP07948 512 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 SKIP12755 728 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 MARK3P27448 753 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 RXRBP28702 533 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 NPEPPSP55786 919 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL13A1-207ENST00000478219 PLEKHG4Q58EX7 1191 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 DCAF17Q5H9S7 520 aaPredicted RBP10.54□□□□□ -0.72
COL13A1-207ENST00000478219 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 RFFLQ8WZ73 363 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 PRR11Q96HE9 360 aaPredicted RBP10.54□□□□□ -0.72
COL13A1-207ENST00000478219 CEP63Q96MT8 703 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 ADAM33Q9BZ11 813 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 BCAS3Q9H6U6 928 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 STK17AQ9UEE5 414 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 PCYOX1Q9UHG3 505 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 NAALADL1Q9UQQ1 740 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 USH1CQ9Y6N9 552 aa10.54□□□□□ -0.72
COL13A1-207ENST00000478219 MROH5Q6ZUA9 1318 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 COL1A1P02452 1464 aaPredicted RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 ARAP2Q8WZ64 1704 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 A6NJR5 290 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 PDLIM1O00151 329 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 HNRNPRO43390 633 aaKnown RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 NR2F2P24468 414 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 GYG1P46976 350 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 SDCCAG8Q86SQ7 713 aaPredicted RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 DNAJC10Q8IXB1 793 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 C10orf82Q8WW14 230 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 NCSTNQ92542 709 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 BRIP1Q9BX63 1249 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 IKZF4Q9H2S9 585 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 HSFX1Q9UBD0 423 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 ALG6Q9Y672 507 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 BZW2Q9Y6E2 419 aaKnown RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 PAPPAQ13219 1627 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 RREB1Q92766 1687 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 SMCO2A6NFE2 343 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 E9PMD0 336 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 MAPK13O15264 365 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 PYGMP11217 842 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CTNNA2P26232 953 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 PTPN4P29074 926 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CHRNA3P32297 505 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CASP4P49662 377 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 NAPAP54920 295 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 EPHA7Q15375 998 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 KIF6Q6ZMV9 814 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CROCCP2Q86T23 111 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 MTDHQ86UE4 582 aaKnown RBP10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 DTNBP1Q96EV8 351 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 TLE6Q9H808 572 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 CCDC87Q9NVE4 849 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 ZNF510Q9Y2H8 683 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 STARD13Q9Y3M8 1113 aa10.53□□□□□ -0.72
COL13A1-207ENST00000478219 C1orf167Q5SNV9 1468 aa10.52□□□□□ -0.72
COL13A1-207ENST00000478219 ATP5HO75947 161 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 DEUP1Q05D60 604 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 SLC34A1Q06495 639 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 LSAMPQ13449 338 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 CALCRLQ16602 461 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 DYDC2Q96IM9 177 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
COL13A1-207ENST00000478219 A0A1B0GUL6 1792 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 NCANO14594 1321 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 PODXLO00592 558 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms