RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TMC7Q7Z402 723 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 KIAA1328Q86T90 577 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CTAGE6Q86UF2 777 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CTAGE4Q8IX94 777 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 GUF1Q8N442 669 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 MSL3Q8N5Y2 521 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC15Q8TF66 581 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 HNRNPLLQ8WVV9 542 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 LARP4BQ92615 738 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 RAD54LQ92698 747 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CUL5Q93034 780 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC17Q96LX7 622 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 MTMR9Q96QG7 549 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PLIN2Q99541 437 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 EIF3CQ99613 913 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CHP1Q99653 195 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TSG101Q99816 390 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 MMTAG2Q9BU76 263 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 NOC4LQ9BVI4 516 aaKnown RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 PARD6BQ9BYG5 372 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TSGA10Q9BZW7 698 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 TTYH3Q9C0H2 523 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 ADAM19Q9H013 955 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CPVLQ9H3G5 476 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 VAT1LQ9HCJ6 419 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 RIC8AQ9NPQ8 531 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 LRWD1Q9UFC0 647 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 POLLQ9UGP5 575 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 RAB21Q9UL25 225 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 ATP6V0A2Q9Y487 856 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 FRMPD2Q68DX3 1309 aaPredicted RBP5.46□□□□□ -1.54
SF3B6-202ENST00000478050 KDM3AQ9Y4C1 1321 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 CEP290O15078 2479 aa5.46□□□□□ -1.54
SF3B6-202ENST00000478050 BRCA1P38398 1863 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 A0A0U1RQJ8 604 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MEGF11A6BM72 1044 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 B4DLN1 442 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 POLRMTO00411 1230 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 PSMD14O00487 310 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 KRT86O43790 486 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 SEC31AO94979 1220 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 TBC1D8O95759 1140 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 AKR1B1P15121 316 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 TRIM21P19474 475 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 VAMP1P23763 118 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MCM3P25205 808 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MAPK8P45983 427 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 HERVK_113P62684 666 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 AMPD2Q01433 879 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 DDR1Q08345 913 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 STK4Q13043 487 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 GPS2Q13227 327 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 PICALMQ13492 652 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MAN2A1Q16706 1144 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 HYIQ5T013 277 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 ANKRD40Q6AI12 368 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MCTP2Q6DN12 878 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 CIAPIN1Q6FI81 312 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 WDR59Q6PJI9 974 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 HHIPL2Q6UWX4 724 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 ADAMTSL4Q6UY14 1074 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 NLGN1Q8N2Q7 840 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 TXLNBQ8N3L3 684 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 KIAA0895Q8NCT3 520 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 SNX29Q8TEQ0 813 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 JAKMIP2Q96AA8 810 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 COA7Q96BR5 231 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 PKNOX2Q96KN3 472 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 RPGRIP1Q96KN7 1286 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 POP1Q99575 1024 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 RBCK1Q9BYM8 510 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 EDEM3Q9BZQ6 932 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 UBXN6Q9BZV1 441 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 ZC3H12CQ9C0D7 883 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 UBA5Q9GZZ9 404 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 NT5C3AQ9H0P0 336 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 EHD4Q9H223 541 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 TAF1DQ9H5J8 278 aaPredicted RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 JMJD4Q9H9V9 463 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 BLOC1S4Q9NUP1 217 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 TMEM260Q9NX78 707 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 PUF60Q9UHX1 559 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 SERPINB13Q9UIV8 391 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 MYO6Q9UM54 1294 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 REXO2Q9Y3B8 237 aaKnown RBP5.45□□□□□ -1.54
SF3B6-202ENST00000478050 SCN9AQ15858 1988 aa5.45□□□□□ -1.54
SF3B6-202ENST00000478050 ANO9A1A5B4 782 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC66A2RUB6 948 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 MYMKA6NI61 221 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ZBTB5O15062 677 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 SLC37A4O43826 429 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 MARCH6O60337 910 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 USO1O60763 962 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 EIF3JO75822 258 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 DDNO94850 711 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms