RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 NR3C2P08235 984 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 ACTN1P12814 892 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 HOXD8P13378 290 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 HOXA13P31271 388 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 HNRNPH1P31943 449 aaKnown RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 HSPA4P34932 840 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 BLVRAP53004 296 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 WDR5P61964 334 aaKnown RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TAP1Q03518 808 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 BFSP2Q13515 415 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 HIC1Q14526 733 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 SMC1AQ14683 1233 aaKnown RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 PTPN14Q15678 1187 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 LONRF1Q17RB8 773 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TCTN1Q2MV58 587 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 MAP7D1Q3KQU3 841 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 FAM133BQ5BKY9 247 aaKnown RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TTC22Q5TAA0 569 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TTC39BQ5VTQ0 682 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 ARHGEF16Q5VV41 709 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 KRT40Q6A162 431 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TRAF7Q6Q0C0 670 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 MTHFD1LQ6UB35 978 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 LRRC8DQ7L1W4 858 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TMCO2Q7Z6W1 182 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 HERC6Q8IVU3 1022 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 OR8K1Q8NGG5 319 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 PPTC7Q8NI37 304 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 GSDMBQ8TAX9 411 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 CAGE1Q8TC20 777 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 BRSK1Q8TDC3 778 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 ADAMTS19Q8TE59 1207 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 AFAP1L1Q8TED9 768 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 KCNN1Q92952 543 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 WNT8BQ93098 351 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 CFAP36Q96G28 342 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 RBM41Q96IZ5 413 aaKnown RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 CORO1BQ9BR76 489 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 PDCD2LQ9BRP1 358 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 AMNQ9BXJ7 453 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 FTOQ9C0B1 505 aaKnown RBP eCLIP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 CERS4Q9HA82 394 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 KIF9Q9HAQ2 790 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 VAT1LQ9HCJ6 419 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 DNAAF2Q9NVR5 837 aaKnown RBP6.43□□□□□ -1.38
TRA2B-211ENST00000477939 GTF2IRD1Q9UHL9 959 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 GTF3C4Q9UKN8 822 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 MTUS1Q9ULD2 1270 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 CEP131Q9UPN4 1083 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 NOD1Q9Y239 953 aa6.43□□□□□ -1.38
TRA2B-211ENST00000477939 TMEM238LA0A1B0GVL6 79 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 ERICH2A1L162 156 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 TMEM221A6NGB7 291 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 C2orf81A6NN90 581 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 H0Y3Z8 333 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 M0QX08 132 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 LSM1O15116 133 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SART1O43290 800 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SLC26A4O43511 780 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SORBS3O60504 671 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 LPXNO60711 386 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 NBNO60934 754 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 BAIAP3O94812 1187 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PENKP01210 267 aaPredicted RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 CXCL10P02778 98 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 CYP21A2P08686 494 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 CKBP12277 381 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 IDEP14735 1019 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SELPP16109 830 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 CASTP20810 708 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 UBA1P22314 1058 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 RRM1P23921 792 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SLC8A1P32418 973 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PSEN2P49810 448 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 KIF11P52732 1056 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 BASP1P80723 227 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 DEFB103AP81534 67 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 MRPS5P82675 430 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SP2Q02086 613 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 TFF2Q03403 129 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PTH1RQ03431 593 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SCRN1Q12765 414 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 MBTPS1Q14703 1052 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 MFSD10Q14728 455 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 GRM4Q14833 912 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PGM5Q15124 567 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 DGKDQ16760 1214 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 TRIM71Q2Q1W2 868 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PLEKHG6Q3KR16 790 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 HSDL1Q3SXM5 330 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SPATA1Q5VX52 437 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 LRRC31Q6UY01 552 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 STOX1Q6ZVD7 989 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 RUFY3Q7L099 469 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 GAS2L3Q86XJ1 694 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 CCDC155Q8N6L0 562 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 TEX9Q8N6V9 391 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 TEX19Q8NA77 164 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms