RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 DPEP1P16444 411 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 HSD17B4P51659 736 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 CYP1B1Q16678 543 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 SEL1L2Q5TEA6 688 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 DENND2CQ68D51 928 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 CCDC121Q6ZUS5 278 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 RPUSD2Q8IZ73 545 aaKnown RBP19.48■□□□□ 0.71
CCM2-209ENST00000477605 FAM151AQ8WW52 585 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 ERVK-5Q9HDB9 667 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 MTUS1Q9ULD2 1270 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 ZBTB21Q9ULJ3 1066 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
CCM2-209ENST00000477605 VGLL3A8MV65 326 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 H0YIN7 160 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 LRRN2O75325 713 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 ALAS1P13196 640 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 PEX5P50542 639 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 GTF2BQ00403 316 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 PPP3CAQ08209 521 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 IFT88Q13099 833 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 RNF187Q5TA31 235 aaPredicted RBP19.48■□□□□ 0.71
CCM2-209ENST00000477605 ZDHHC24Q6UX98 284 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 LDHDQ86WU2 507 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 FAM71AQ8IYT1 594 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 PRELID2Q8N945 189 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 RDH13Q8NBN7 331 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 BANK1Q8NDB2 785 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 SUPT20HQ8NEM7 779 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 SLC20A1Q8WUM9 679 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 CABS1Q96KC9 395 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 TRIM31Q9BZY9 425 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 RPTORQ8N122 1335 aa19.48■□□□□ 0.71
CCM2-209ENST00000477605 TMOD1P28289 359 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 UBXN2AP68543 259 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 ZNF211Q13398 564 aaPredicted RBP19.47■□□□□ 0.71
CCM2-209ENST00000477605 SLMAPQ14BN4 828 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 C6orf118Q5T5N4 469 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 ARHGEF19Q8IW93 802 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 GLG1Q92896 1179 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 TATDN2Q93075 761 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 STMN4Q9H169 189 aaPredicted RBP19.47■□□□□ 0.71
CCM2-209ENST00000477605 EPB41L4BQ9H329 900 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 GRHL1Q9NZI5 618 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 GTF2A1P52655 376 aaPredicted RBP19.47■□□□□ 0.71
CCM2-209ENST00000477605 SMTNP53814 917 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 DLG4P78352 724 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 GHRHRQ02643 423 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 ADCY2Q08462 1091 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 ERMARDQ5T6L9 678 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 GKAP1Q5VSY0 366 aaPredicted RBP19.47■□□□□ 0.71
CCM2-209ENST00000477605 CYFIP1Q7L576 1253 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 CACNA2D3Q8IZS8 1091 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 CD101Q93033 1021 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 SEC16BQ96JE7 1060 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 HSPBP1Q9NZL4 362 aa19.47■□□□□ 0.71
CCM2-209ENST00000477605 ZNF646O15015 1829 aaPredicted RBP19.46■□□□□ 0.71
CCM2-209ENST00000477605 RBBP6Q7Z6E9 1792 aaKnown RBP19.46■□□□□ 0.71
CCM2-209ENST00000477605 TBC1D12O60347 775 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 CYP1A2P05177 515 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 KCNA3P22001 575 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 PLTPP55058 493 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 MFAP3P55082 362 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 C1orf220Q5T0J3 134 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 FBXW10Q5XX13 1052 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 SAMD3Q8N6K7 520 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 CNKSR1Q969H4 720 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 XPO6Q96QU8 1125 aaKnown RBP19.46■□□□□ 0.71
CCM2-209ENST00000477605 TMOD4Q9NZQ9 345 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 UVRAGQ9P2Y5 699 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 NOCTQ9UK39 431 aaKnown RBP19.46■□□□□ 0.71
CCM2-209ENST00000477605 SNX24Q9Y343 169 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 LOXHD1Q8IVV2 1947 aa19.46■□□□□ 0.71
CCM2-209ENST00000477605 GOLGA6L7A0A1B0GV03 622 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 AGTP01019 485 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 ITGB5P18084 799 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 COMTP21964 271 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 RARRES1P49788 294 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 MXI1P50539 228 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 LACTB2Q53H82 288 aaPredicted RBP19.45■□□□□ 0.7
CCM2-209ENST00000477605 C12orf50Q8NA57 414 aaPredicted RBP19.45■□□□□ 0.7
CCM2-209ENST00000477605 EPS8L1Q8TE68 723 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 HVCN1Q96D96 273 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 KCNH7Q9NS40 1196 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 EXOC7Q9UPT5 735 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 PCDHA3Q9Y5H8 950 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 ZHX2Q9Y6X8 837 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 DHX15O43143 795 aaKnown RBP19.45■□□□□ 0.7
CCM2-209ENST00000477605 CAND2O75155 1236 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 CHRNB2P17787 502 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 MMP13P45452 471 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 QARSP47897 775 aaKnown RBP19.45■□□□□ 0.7
CCM2-209ENST00000477605 GCLMP48507 274 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 HAUS6Q7Z4H7 955 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 FBXO25Q8TCJ0 367 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 CHMP6Q96FZ7 201 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 PCIF1Q9H4Z3 704 aa19.45■□□□□ 0.7
CCM2-209ENST00000477605 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
CCM2-209ENST00000477605 GTF3C4Q9UKN8 822 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms