RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ZNF445P59923 1031 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 GPNMBQ14956 572 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 CT47A1Q5JQC4 288 aaPredicted RBP17.73■□□□□ 0.43
VHL-203ENST00000477538 CENPPQ6IPU0 288 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 SLC39A4Q6P5W5 647 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 HS2ST1Q7LGA3 356 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 IFIH1Q9BYX4 1025 aaKnown RBP17.73■□□□□ 0.43
VHL-203ENST00000477538 PIN4Q9Y237 131 aaKnown RBP17.73■□□□□ 0.43
VHL-203ENST00000477538 MKI67P46013 3256 aaKnown RBP17.73■□□□□ 0.43
VHL-203ENST00000477538 TRIM49BA6NDI0 452 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 TISP43B9A030 160 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 N4BP3O15049 544 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 CALUO43852 315 aaPredicted RBP17.72■□□□□ 0.43
VHL-203ENST00000477538 TOM1L1O75674 476 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 HOXA11P31270 313 aaPredicted RBP17.72■□□□□ 0.43
VHL-203ENST00000477538 STX17P56962 302 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 ZCWPW2Q504Y3 356 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 MFSD5Q6N075 450 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 NOTUMQ6P988 496 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 DEFB128Q7Z7B8 93 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 TSG101Q99816 390 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 PDZD7Q9H5P4 517 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 AGPAT3Q9NRZ7 376 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 CGNQ9P2M7 1197 aaKnown RBP17.72■□□□□ 0.43
VHL-203ENST00000477538 ANKFY1Q9P2R3 1169 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 RWDD2AQ9UIY3 292 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 TNFSF13BQ9Y275 285 aa17.72■□□□□ 0.43
VHL-203ENST00000477538 A0A1B0GUA9 196 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 BICDL2A1A5D9 508 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 CXCL10P02778 98 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 PROZP22891 400 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.43
VHL-203ENST00000477538 MATR3P43243 847 aaKnown RBP eCLIP17.71■□□□□ 0.43
VHL-203ENST00000477538 PMS1P54277 932 aaKnown RBP17.71■□□□□ 0.43
VHL-203ENST00000477538 SNRPFP62306 86 aaKnown RBP17.71■□□□□ 0.43
VHL-203ENST00000477538 LRRC63Q05C16 580 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 ZNF568Q3ZCX4 644 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 PLEKHG4Q58EX7 1191 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 EEF1DP3Q658K8 133 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 ANKRD40Q6AI12 368 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 ARMCX5Q6P1M9 558 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 MPZL3Q6UWV2 235 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 CDR2LQ86X02 465 aaPredicted RBP17.71■□□□□ 0.43
VHL-203ENST00000477538 SEPT8Q92599 483 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 ZBTB45Q96K62 511 aaPredicted RBP17.71■□□□□ 0.43
VHL-203ENST00000477538 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
VHL-203ENST00000477538 TMX1Q9H3N1 280 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 CHST12Q9NRB3 414 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 TRAF3IP3Q9Y228 551 aa17.71■□□□□ 0.43
VHL-203ENST00000477538 CEP290O15078 2479 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 FNDC1Q4ZHG4 1894 aaPredicted RBP17.7■□□□□ 0.42
VHL-203ENST00000477538 ABLIM1O14639 778 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 CLIC2O15247 247 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 CLDN3O15551 220 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 CSF2RAP15509 400 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 ZSCAN20P17040 1043 aaPredicted RBP17.7■□□□□ 0.42
VHL-203ENST00000477538 SYN1P17600 705 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 GARTP22102 1010 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
VHL-203ENST00000477538 EDRF1Q3B7T1 1238 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 SLFN12LQ6IEE8 588 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 SLC27A1Q6PCB7 646 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 ZBTB33Q86T24 672 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 DBF4BQ8NFT6 615 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 POMGNT1Q8WZA1 660 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 APBB2Q92870 758 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 CCDC51Q96ER9 411 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 ADPGKQ9BRR6 497 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 TCHPQ9BT92 498 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 PCDH10Q9P2E7 1040 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
VHL-203ENST00000477538 STYXL1Q9Y6J8 313 aa17.7■□□□□ 0.42
VHL-203ENST00000477538 MGEA5O60502 916 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 NR3C1P04150 777 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 HARSP12081 509 aaKnown RBP17.69■□□□□ 0.42
VHL-203ENST00000477538 ADSSP30520 456 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 ZNF165P49910 485 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 DSC3Q14574 896 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 NFIL3Q16649 462 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 TWF2Q6IBS0 349 aaKnown RBP17.69■□□□□ 0.42
VHL-203ENST00000477538 FOXR2Q6PJQ5 311 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 APBB1IPQ7Z5R6 666 aaPredicted RBP17.69■□□□□ 0.42
VHL-203ENST00000477538 C12orf56Q8IXR9 622 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 BADQ92934 168 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 MED15Q96RN5 788 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 CBWD1Q9BRT8 395 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 MSTO1Q9BUK6 570 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 FTHL17Q9BXU8 183 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 HAPLN2Q9GZV7 340 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 CDT1Q9H211 546 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 PCIF1Q9H4Z3 704 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 PDE4DIPQ5VU43 2346 aa17.69■□□□□ 0.42
VHL-203ENST00000477538 A0A0B4J269 797 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 NPTXRO95502 500 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 CAVIN2O95810 425 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms