RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
HDLBP-236ENST00000477477 TDRD5Q8NAT2 981 aaKnown RBP12.65□□□□□ -0.38
HDLBP-236ENST00000477477 ASAP3Q8TDY4 903 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 CPB2Q96IY4 423 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 KLHL5Q96PQ7 755 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 TTC12Q9H892 705 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-236ENST00000477477 SFXN1Q9H9B4 322 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 DBR1Q9UK59 544 aaKnown RBP12.65□□□□□ -0.38
HDLBP-236ENST00000477477 SORCS3Q9UPU3 1222 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 USTQ9Y2C2 406 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 BRD1O95696 1058 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 SOD2P04179 222 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 SSBP05455 408 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDLBP-236ENST00000477477 CNPP09543 421 aaKnown RBP12.64□□□□□ -0.39
HDLBP-236ENST00000477477 KLRC2P26717 231 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 ARL2P36404 184 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 MLH1P40692 756 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 RARRES1P49788 294 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 NCBP1Q09161 790 aaKnown RBP12.64□□□□□ -0.39
HDLBP-236ENST00000477477 TCF15Q12870 199 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 TMC5Q6UXY8 1006 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 COLGALT2Q8IYK4 626 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 UBALD2Q8IYN6 164 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 FEZF2Q8TBJ5 459 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 MTMR9Q96QG7 549 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 GAD1Q99259 594 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 HERC2P3Q9BVR0 1158 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 NFKBIZQ9BYH8 718 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 CSRNP2Q9H175 543 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 MRPL17Q9NRX2 175 aaKnown RBP12.64□□□□□ -0.39
HDLBP-236ENST00000477477 PRG3Q9Y2Y8 225 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-236ENST00000477477 HES2Q9Y543 173 aa12.64□□□□□ -0.39
HDLBP-236ENST00000477477 ARL5CA6NH57 179 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 PDGFBP01127 241 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-236ENST00000477477 URODP06132 367 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 ARF4P18085 180 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-236ENST00000477477 GLRA2P23416 452 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 AVPR2P30518 371 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 TXKP42681 527 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 OR1G1P47890 313 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 SCNN1GP51170 649 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 FOSBP53539 338 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 DSC1Q08554 894 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 ST3GAL1Q11201 340 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 TRIM29Q14134 588 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 CCDC149Q6ZUS6 474 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 GPR149Q86SP6 731 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-236ENST00000477477 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 CCDC43Q96MW1 224 aaKnown RBP12.63□□□□□ -0.39
HDLBP-236ENST00000477477 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 POLR3FQ9H1D9 316 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-236ENST00000477477 GIT1Q9Y2X7 761 aa12.63□□□□□ -0.39
HDLBP-236ENST00000477477 ARID2Q68CP9 1835 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 POTEMA6NI47 508 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 C2CD2LO14523 706 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 B4GALT5O43286 388 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 USO1O60763 962 aaKnown RBP12.62□□□□□ -0.39
HDLBP-236ENST00000477477 EFEMP2O95967 443 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 ASGR2P07307 311 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 TAS1R1Q7RTX1 841 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 PIGOQ8TEQ8 1089 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 ZFP42Q96MM3 310 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 RPS6KC1Q96S38 1066 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 APOL6Q9BWW8 343 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 TRIM6Q9C030 488 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-236ENST00000477477 TMEM60Q9H2L4 133 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 SMOC2Q9H3U7 446 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
HDLBP-236ENST00000477477 MIOSQ9NXC5 875 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 SSX2IPQ9Y2D8 614 aa12.62□□□□□ -0.39
HDLBP-236ENST00000477477 ZMYM2Q9UBW7 1377 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 ADH1AP07327 375 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 SPATA31C1P0DKV0 1188 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
HDLBP-236ENST00000477477 GLUD2P49448 558 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 NEK4P51957 841 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 GSTCDQ8NEC7 633 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 CMASQ8NFW8 434 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-236ENST00000477477 TUFT1Q9NNX1 390 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 GPRC5CQ9NQ84 441 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 LIMD1Q9UGP4 676 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 CACNA1HO95180 2353 aa12.61□□□□□ -0.39
HDLBP-236ENST00000477477 A0A087WWV3 80 aa12.6□□□□□ -0.39
HDLBP-236ENST00000477477 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
HDLBP-236ENST00000477477 LRRIQ4A6NIV6 560 aa12.6□□□□□ -0.39
HDLBP-236ENST00000477477 F8W810 466 aa12.6□□□□□ -0.39
HDLBP-236ENST00000477477 TEX28O15482 410 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms