RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RAD51Q06609 339 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 MAP3K4Q9Y6R4 1608 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 PRAMEP78395 509 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 TMEM106CQ9BVX2 250 aa19.72■□□□□ 0.75
VARS2-209ENST00000477288 TNPO2O14787 897 aaKnown RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 MYO1DO94832 1006 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 CASP1P29466 404 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 MAP3K20Q9NYL2 800 aaKnown RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 MROH7-TTC4A0A0A0MT08 1334 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 MFAP3LO75121 409 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 LMNAP02545 664 aaKnown RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 NAALADL2Q58DX5 795 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 FAM20AQ96MK3 541 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 RPAP3Q9H6T3 665 aaPredicted RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 DCTN4Q9UJW0 460 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 POTEFA5A3E0 1075 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 POTEIP0CG38 1075 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 CLCN6P51797 869 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 POTEGQ6S5H5 508 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 POTEEQ6S8J3 1075 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 GJB4Q9NTQ9 266 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 LCMT1Q9UIC8 334 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 LRRC23Q53EV4 343 aaPredicted RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 PATL1Q86TB9 770 aaKnown RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 OR6J1Q8NGC5 347 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
VARS2-209ENST00000477288 LRRC37BQ96QE4 947 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 DHX35Q9H5Z1 703 aaKnown RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 CLCA2Q9UQC9 943 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 GFPT1Q06210 699 aaPredicted RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 RRM2BQ7LG56 351 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 ADGRF4Q8IZF3 695 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 ZNF564Q8TBZ8 553 aaPredicted RBP19.71■□□□□ 0.75
VARS2-209ENST00000477288 RMDN1Q96DB5 314 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 MTBPQ96DY7 904 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 YIPF2Q9BWQ6 316 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 SLC13A1Q9BZW2 595 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 FBXL5Q9UKA1 691 aa19.71■□□□□ 0.75
VARS2-209ENST00000477288 CYB5R4Q7L1T6 521 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 ZNF507Q8TCN5 953 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 CELF1Q92879 486 aaKnown RBP19.7■□□□□ 0.74
VARS2-209ENST00000477288 LXNQ9BS40 222 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 ATP1A3P13637 1013 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 GRIK1P39086 918 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 ZNF211Q13398 564 aaPredicted RBP19.7■□□□□ 0.74
VARS2-209ENST00000477288 OR9Q1Q8NGQ5 310 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 WDR48Q8TAF3 677 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 INTS2Q9H0H0 1204 aaKnown RBP19.7■□□□□ 0.74
VARS2-209ENST00000477288 ELP3Q9H9T3 547 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 PSMC5P62195 406 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 KLHL38Q2WGJ6 581 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 SIRT2Q8IXJ6 389 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 AGR3Q8TD06 166 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 MAN1A2O60476 641 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 KCNA2P16389 499 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 KCNH2Q12809 1159 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 PPP1R18Q6NYC8 613 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 KDELC2Q7Z4H8 507 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 OR6P1Q8NGX9 317 aa19.7■□□□□ 0.74
VARS2-209ENST00000477288 LRRC53A6NM62 1247 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 A2ML1A8K2U0 1454 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 ZNF235Q14590 738 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 SLC9A5Q14940 896 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 BEND6Q5SZJ8 279 aaPredicted RBP19.69■□□□□ 0.74
VARS2-209ENST00000477288 FAM102AQ5T9C2 384 aaPredicted RBP19.69■□□□□ 0.74
VARS2-209ENST00000477288 NUDT18Q6ZVK8 323 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 KCNV2Q8TDN2 545 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 B4GALNT2Q8NHY0 566 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 ITPRIPL1Q6GPH6 555 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 ZNF746Q6NUN9 644 aaPredicted RBP19.69■□□□□ 0.74
VARS2-209ENST00000477288 ATXN7L3BQ96GX2 97 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 YY1AP1Q9H869 796 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 IP6K2Q9UHH9 426 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 ASB14A6NK59 587 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 MIF4GDA9UHW6 222 aaKnown RBP19.69■□□□□ 0.74
VARS2-209ENST00000477288 F5H6K3 240 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 GYS2P54840 703 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 KLRC3Q07444 240 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 KNOP1Q1ED39 458 aaKnown RBP19.69■□□□□ 0.74
VARS2-209ENST00000477288 MXD3Q9BW11 206 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 RBAKQ9NYW8 714 aaPredicted RBP19.69■□□□□ 0.74
VARS2-209ENST00000477288 TJP2Q9UDY2 1190 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 IQGAP3Q86VI3 1631 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 ROR1Q01973 937 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 PDCLQ13371 301 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 CYP4F11Q9HBI6 524 aa19.69■□□□□ 0.74
VARS2-209ENST00000477288 EFCAB14O75071 495 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 ASMTLO95671 621 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 KCNJ6P48051 423 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 TRIM54Q9BYV2 358 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 SEL1LQ9UBV2 794 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 SPATA31A3Q5VYP0 1347 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 SERPIND1P05546 499 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 FASTKD1Q53R41 847 aaKnown RBP19.68■□□□□ 0.74
VARS2-209ENST00000477288 PIN4Q9Y237 131 aaKnown RBP19.68■□□□□ 0.74
VARS2-209ENST00000477288 CCDC188H7C350 402 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 CD2BP2O95400 341 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms