RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.21
CLSTN1-205ENST00000477264 TMEM120BA0PK00 339 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 DPPA5A6NC42 116 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 PON1P27169 355 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 CDC25CP30307 473 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 GALCP54803 685 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 HADHBP55084 474 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 U2AF1L4Q8WU68 220 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 MAGEB18Q96M61 343 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 METTL14Q9HCE5 456 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 IL17RBQ9NRM6 502 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 PCDHA2Q9Y5H9 948 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 PEX11AO75192 247 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 TTLL1O95922 423 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 GSTA2P09210 222 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 KRT13P13646 458 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 RPL21P46778 160 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 PICALMQ13492 652 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 PRPF4BQ13523 1007 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 SETDB1Q15047 1291 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 MTFR1Q15390 333 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 IRGCQ6NXR0 463 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 DRAXINQ8NBI3 349 aaPredicted RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 ARHGEF2Q92974 986 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 DTNBP1Q96EV8 351 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 BICD1Q96G01 975 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 ETNK1Q9HBU6 452 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 PNMA3Q9UL41 463 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 ZNRF3Q9ULT6 936 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
CLSTN1-205ENST00000477264 SLC16A3O15427 465 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 RAD17O75943 681 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 VCAM1P19320 739 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 CTNNA2P26232 953 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 STAT1P42224 750 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 RASSF2P50749 326 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 RAD23BP54727 409 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 STRN3Q13033 797 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 PTPROQ16827 1216 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ARHGEF18Q6ZSZ5 1173 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 SLC30A5Q8TAD4 765 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ASAP3Q8TDY4 903 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ERVK-5Q9HDB9 667 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 CTTNBP2NLQ9P2B4 639 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 TRAF3IP3Q9Y228 551 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 PASKQ96RG2 1323 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 TPBGLP0DKB5 382 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ACTN1P12814 892 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 SLC9A1P19634 815 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 NR2F2P24468 414 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 PEX5P50542 639 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 EVX2Q03828 476 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 EPHA7Q15375 998 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 APOBEC3HQ6NTF7 200 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 C11orf63Q6NUN7 778 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 VSTM1Q6UX27 236 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 PPP1R21Q6ZMI0 780 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 UBL4BQ8N7F7 174 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 SLC35G2Q8TBE7 412 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ART4Q93070 314 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 TGS1Q96RS0 853 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 NR2E1Q9Y466 385 aa16.37■□□□□ 0.21
CLSTN1-205ENST00000477264 PFASO15067 1338 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 POTEMA6NI47 508 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 HNRNPCL1O60812 293 aaKnown RBP16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 TCEA3O75764 348 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 FGFR4P22455 802 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 DYNC1I2Q13409 638 aaKnown RBP16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 CYP1B1Q16678 543 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 ZNF568Q3ZCX4 644 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 TRIM68Q6AZZ1 485 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 CDC42EP5Q6NZY7 148 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 KCNK18Q7Z418 384 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 NELFCDQ8IXH7 590 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 RHOT2Q8IXI1 618 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 KCNV2Q8TDN2 545 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 GLG1Q92896 1179 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 ACTL7BQ9Y614 415 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 ADGRA3Q8IWK6 1321 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 VIL1P09327 827 aaKnown RBP16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 POLGP54098 1239 aaPredicted RBP16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 SF3A3Q12874 501 aaKnown RBP eCLIP16.36■□□□□ 0.213e-8■■■■□ 21.4
CLSTN1-205ENST00000477264 ZRSR2Q15696 482 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms