RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 ITGB1P05556 798 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 GUCY2CP25092 1073 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 CLCN1P35523 988 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 DDIT3P35638 169 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 DHX8Q14562 1220 aaKnown RBP9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 SHC4Q6S5L8 630 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 GSTCDQ8NEC7 633 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 ADAMTS19Q8TE59 1207 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 CCDC43Q96MW1 224 aaKnown RBP9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 FIZ1Q96SL8 496 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 TMEM117Q9H0C3 514 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 LRFN2Q9ULH4 789 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 PCDHGC5Q9Y5F6 944 aa9.95□□□□□ -0.82
SSX2IP-206ENST00000476905 FNDC1Q4ZHG4 1894 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 EOMESO95936 686 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 SSBP05455 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 HSP90AA1P07900 732 aaKnown RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 CTNNB1P35222 781 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 NAMPTP43490 491 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 PEX3P56589 373 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 GPM6BQ13491 265 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 TFDP1Q14186 410 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 FAM187BQ17R55 369 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 FAM43BQ6ZT52 329 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 TMEM173Q86WV6 379 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 ZNF280BQ86YH2 543 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 KLHL23Q8NBE8 558 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 SPPL3Q8TCT6 385 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 TMC2Q8TDI7 906 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 RAD54LQ92698 747 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 GAS2L1Q99501 681 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 DACT1Q9NYF0 836 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 ARHGAP28Q9P2N2 729 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 PLAGL2Q9UPG8 496 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 ABLIM1O14639 778 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 SPTLC2O15270 562 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 MEFVO15553 781 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 RFX1P22670 979 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 IRS1P35568 1242 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 GIT2Q14161 759 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 BCL7CQ8WUZ0 217 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 REEP2Q9BRK0 252 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 NTPCRQ9BSD7 190 aaKnown RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 NXF3Q9H4D5 531 aaKnown RBP9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 PDZD7Q9H5P4 517 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 LIMD1Q9UGP4 676 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 IPPQ9Y573 584 aa9.94□□□□□ -0.82
SSX2IP-206ENST00000476905 ACKR2O00590 384 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 SLC16A4O15374 487 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 DDHD2O94830 711 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 KIFAP3Q92845 792 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 ZFP42Q96MM3 310 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 NT5C3AQ9H0P0 336 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 PTPRHQ9HD43 1115 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 TBC1D13Q9NVG8 400 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 DNAJB4Q9UDY4 337 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 RCOR1Q9UKL0 485 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 PCDHA7Q9UN72 937 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 CUL9Q8IWT3 2517 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 MYMKA6NI61 221 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 NT5C1B-RDH14C9J2C7 533 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 PPP6R2O75170 966 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 PRKCBP05771 671 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 RB1P06400 928 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 LIG1P18858 919 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 AKAP5P24588 427 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 IGFBP6P24592 240 aaPredicted RBP9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 GTF2F1P35269 517 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■■■□□ 17.3
SSX2IP-206ENST00000476905 STK38Q15208 465 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 GPBP1Q86WP2 473 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 COLGALT1Q8NBJ5 622 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 TMEM161BQ8NDZ6 487 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 DNAJC19Q96DA6 116 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 ZBTB45Q96K62 511 aaPredicted RBP9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 HAPLN2Q9GZV7 340 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 NRDE2Q9H7Z3 1164 aa9.93□□□□□ -0.82
SSX2IP-206ENST00000476905 CNTNAP2Q9UHC6 1331 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 COL4A4P53420 1690 aaPredicted RBP9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 CCDC169A6NNP5 214 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 F8W810 466 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 SLC26A4O43511 780 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 ERLIN2O94905 339 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 CSPG5O95196 566 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 NPTXRO95502 500 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 YEATS4O95619 227 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 AXLP30530 894 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 ZNF131P52739 623 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 ERVFC1P60507 584 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 NOTUMQ6P988 496 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 CEP120Q8N960 986 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 DEPTORQ8TB45 409 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 STAMQ92783 540 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 MRPL38Q96DV4 380 aaKnown RBP9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 CALML4Q96GE6 196 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 SAMD11Q96NU1 681 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 GAD1Q99259 594 aa9.92□□□□□ -0.82
SSX2IP-206ENST00000476905 TARS2Q9BW92 718 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms