RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CYP39A1Q9NYL5 469 aa17.8■□□□□ 0.44
TMEM53-208ENST00000476724 TCEAL9Q9UHQ7 104 aa17.8■□□□□ 0.44
TMEM53-208ENST00000476724 EXOC7Q9UPT5 735 aa17.8■□□□□ 0.44
TMEM53-208ENST00000476724 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
TMEM53-208ENST00000476724 EMSYQ7Z589 1322 aa17.8■□□□□ 0.44
TMEM53-208ENST00000476724 CXCL11O14625 94 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 SHOX2O60902 331 aaPredicted RBP17.79■□□□□ 0.44
TMEM53-208ENST00000476724 HADHBP55084 474 aaKnown RBP17.79■□□□□ 0.44
TMEM53-208ENST00000476724 PPIL2Q13356 520 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 MOGSQ13724 837 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 PPP2R5EQ16537 467 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 MAEAQ7L5Y9 396 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 CD302Q8IX05 232 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 AGPAT1Q99943 283 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 GOLPH3Q9H4A6 298 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 NOC2LQ9Y3T9 749 aaKnown RBP17.79■□□□□ 0.44
TMEM53-208ENST00000476724 WDR64B1ANS9 1081 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 FOXN3O00409 490 aaPredicted RBP17.79■□□□□ 0.44
TMEM53-208ENST00000476724 NCKAP1LP55160 1127 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 ARHGAP44Q17R89 818 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 MAATS1Q7Z4T9 603 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 DNAAF5Q86Y56 855 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 RHOT2Q8IXI1 618 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 C1orf131Q8NDD1 294 aaKnown RBP17.79■□□□□ 0.44
TMEM53-208ENST00000476724 CCDC26Q8TAB7 109 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 HVCN1Q96D96 273 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 ZIM3Q96PE6 472 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
TMEM53-208ENST00000476724 DOCK5Q9H7D0 1870 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 BHMG1C9JSJ3 638 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 KRIT1O00522 736 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 MAFGO15525 162 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 SART1O43290 800 aaKnown RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 ATP9AO75110 1047 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 TCEAL1Q15170 157 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 LDLRAD1Q5T700 205 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 LRRC31Q6UY01 552 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 NAP1L3Q99457 506 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 ASCC2Q9H1I8 757 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 R3HDMLQ9H3Y0 253 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 PCIF1Q9H4Z3 704 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 UBE2TQ9NPD8 197 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 PFASO15067 1338 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 ESYT3A0FGR9 886 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 TESPA1A2RU30 521 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 BUB1BO60566 1050 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-208ENST00000476724 SMTNP53814 917 aa17.78■□□□□ 0.44
TMEM53-208ENST00000476724 NR3C2P08235 984 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 FAM153BP0C7A2 387 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 HSPA9P38646 679 aaKnown RBP17.77■□□□□ 0.44
TMEM53-208ENST00000476724 DLG4P78352 724 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 IRX3P78415 501 aaPredicted RBP17.77■□□□□ 0.44
TMEM53-208ENST00000476724 PPP3CAQ08209 521 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 FAM153CQ494X1 144 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 VSIG10LQ86VR7 867 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 SENP7Q9BQF6 1050 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 CBWD1Q9BRT8 395 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 PAGR1Q9BTK6 254 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 CARD9Q9H257 536 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 RRAGCQ9HB90 399 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 OSGEPQ9NPF4 335 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 FAM153AQ9UHL3 310 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.44
TMEM53-208ENST00000476724 DKC1O60832 514 aaKnown RBP eCLIP17.76■□□□□ 0.43
TMEM53-208ENST00000476724 CNMDO75829 334 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 PEX3P56589 373 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 XKR9Q5GH70 373 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 LRRC45Q96CN5 670 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 C17orf75Q9HAS0 396 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 BACH1O14867 736 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 PPFIA4O75335 1185 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 RGS20O76081 388 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 ABCB4P21439 1286 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 CCND2P30279 289 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 ZNF746Q6NUN9 644 aaPredicted RBP17.76■□□□□ 0.43
TMEM53-208ENST00000476724 AP1M1Q9BXS5 423 aa17.76■□□□□ 0.43
TMEM53-208ENST00000476724 SEPT11Q9NVA2 429 aaKnown RBP17.76■□□□□ 0.43
TMEM53-208ENST00000476724 SLC16A4O15374 487 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 GCLMP48507 274 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 MXI1P50539 228 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 ERVK-9P63128 1117 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 SKOR1P84550 965 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 C1orf220Q5T0J3 134 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 GPAT2Q6NUI2 795 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 OTUD6AQ7L8S5 288 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 RIOX2Q8IUF8 465 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 NSUN6Q8TEA1 469 aaKnown RBP17.75■□□□□ 0.43
TMEM53-208ENST00000476724 GPRASP2Q96D09 838 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 CAPS2Q9BXY5 557 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 SPATC1LQ9H0A9 340 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 THAP2Q9H0W7 228 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 TXNRD2Q9NNW7 524 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 DDX3YO15523 660 aaKnown RBP17.75■□□□□ 0.43
TMEM53-208ENST00000476724 LRRN2O75325 713 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 GZMAP12544 262 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 GUCY2FP51841 1108 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms