RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 HACE1Q8IYU2 909 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 TMEM169Q96HH4 297 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 TCF25Q9BQ70 676 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 C2orf40Q9H1Z8 148 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 BHMT2Q9H2M3 363 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 TBC1D13Q9NVG8 400 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 PRMT7Q9NVM4 692 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 SPG21Q9NZD8 308 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 DENND4AQ7Z401 1863 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 MEIS3P2A8K0S8 358 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 M0R296 226 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 TBX10O75333 385 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 OFD1O75665 1012 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 ITGA4P13612 1032 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 ARF4P18085 180 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 CYP11B2P19099 503 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 PDCP20941 246 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 NAMPTP43490 491 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 NRIP1P48552 1158 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 BCAR1P56945 870 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 ERVFC1P60507 584 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 SMAD4Q13485 552 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 CUL4AQ13619 759 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 BMS1Q14692 1282 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 ECM1Q16610 540 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 UBXN11Q5T124 520 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 PLPP4Q5VZY2 271 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 ARL6IP4Q66PJ3 421 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 CDCA2Q69YH5 1023 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 RBM23Q86U06 439 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 EFHBQ8N7U6 833 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 KIFAP3Q92845 792 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 CPB2Q96IY4 423 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 CSRNP2Q9H175 543 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 TLE6Q9H808 572 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 NGRNQ9NPE2 291 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 IPPQ9Y573 584 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 VWA8A3KMH1 1905 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 GVINP1Q7Z2Y8 2422 aa12.6□□□□□ -0.39
NUDCD3-206ENST00000475952 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 FSCN2O14926 492 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 LINC01565O15544 149 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 GFRA3O60609 400 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 BMP15O95972 392 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 GTF2F1P35269 517 aaKnown RBP eCLIP12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 MAPK6Q16659 721 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 AMHR2Q16671 573 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 SLC27A1Q6PCB7 646 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 DEPTORQ8TB45 409 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 CDK5RAP3Q96JB5 506 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 IFT74Q96LB3 600 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 FAM193BQ96PV7 902 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 PRRX2Q99811 253 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 FAM86C1Q9NVL1 165 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 DNM3Q9UQ16 869 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 PCDHGC5Q9Y5F6 944 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 ANK1P16157 1881 aa12.59□□□□□ -0.39
NUDCD3-206ENST00000475952 ZMYM2Q9UBW7 1377 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 VWA3AA6NCI4 1184 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 PP2D1A8MPX8 630 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 NT5C1B-RDH14C9J2C7 533 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 B4GALT5O43286 388 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 EYA4O95677 639 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 CA8P35219 290 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 FOXK2Q01167 660 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 ADAM15Q13444 863 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 SMC1AQ14683 1233 aaKnown RBP12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 IL17AQ16552 155 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 FAM187BQ17R55 369 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 TMC7Q7Z402 723 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 SMG8Q8ND04 991 aaKnown RBP12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 BSNDQ8WZ55 320 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 TMEM175Q9BSA9 504 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 NT5C3AQ9H0P0 336 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 NRDE2Q9H7Z3 1164 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 STK39Q9UEW8 545 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 CD207Q9UJ71 328 aa12.58□□□□□ -0.4
NUDCD3-206ENST00000475952 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 TCHHQ07283 1943 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 A0A1B0GUA9 196 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 E9PMD0 336 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 N4BP3O15049 544 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms