RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DDR2Q16832 855 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ZNF423Q2M1K9 1284 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 MTERF2Q49AM1 385 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 CEP55Q53EZ4 464 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 TPGS2Q68CL5 300 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 NAIF1Q69YI7 327 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 NUP54Q7Z3B4 507 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SPATA21Q7Z572 469 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 MAP4K3Q8IVH8 894 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 CAMKK1Q8N5S9 505 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 C2orf69Q8N8R5 385 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 CENPIQ92674 756 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 FERMT2Q96AC1 680 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 CDCA5Q96FF9 252 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 FAXDC2Q96IV6 333 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 BRD8Q9H0E9 1235 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 TRPV6Q9H1D0 765 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ST7Q9NRC1 585 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 C19orf53Q9UNZ5 99 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 EPG5Q9HCE0 2579 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GNAT3A8MTJ3 354 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 H7C1W4 665 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 BIN1O00499 593 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GABRDO14764 452 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ADCY5O95622 1261 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ALAS1P13196 640 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 CSTF2P33240 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 KRT9P35527 623 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SOX6P35712 828 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 KCNC4Q03721 635 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SGCGQ13326 291 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SLC9C1Q4G0N8 1177 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 TLDC1Q6P9B6 456 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 STRA8Q7Z7C7 330 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GALNT7Q86SF2 657 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GPC2Q8N158 579 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SUPT20HQ8NEM7 779 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 VPS39Q96JC1 886 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 NT5C1BQ96P26 610 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 PIGSQ96S52 555 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SPON2Q9BUD6 331 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 FOXP3Q9BZS1 431 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GLT8D2Q9H1C3 349 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 WNT5BQ9H1J7 359 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 SMARCAD1Q9H4L7 1026 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 DNAJC18Q9H819 358 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 PARVGQ9HBI0 331 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 AGO4Q9HCK5 861 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 DDX20Q9UHI6 824 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 PTBP2Q9UKA9 531 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ZNF318Q5VUA4 2279 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 EIF3AQ14152 1382 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 B4E171 279 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 OFD1O75665 1012 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 SERPINC1P01008 464 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 GCP02774 474 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 OPN1MWP04001 364 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 OPN1MW2P0DN77 364 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 OPN1MW3P0DN78 364 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 ARF4P18085 180 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 SFPQP23246 707 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 IFNAR2P48551 515 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 PSMD7P51665 324 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 TKTL1P51854 596 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 NLRP5P59047 1200 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 DR1Q01658 176 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 GPS2Q13227 327 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 MAJINQ3KP22 176 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR139Q6DWJ6 353 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 RAB12Q6IQ22 244 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 TAOK1Q7L7X3 1001 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 DNAJB7Q7Z6W7 309 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 SLFN12Q8IYM2 578 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 SMYD1Q8NB12 490 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 CTCFLQ8NI51 663 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 DHX58Q96C10 678 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 CLIP3Q96DZ5 547 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 UBXN10Q96LJ8 280 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 C16orf45Q96MC5 204 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 MTMR9Q96QG7 549 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 TCF12Q99081 682 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 NACAP1Q9BZK3 213 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 C8orf33Q9H7E9 229 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.6□□□□□ -1.352e-6■■■■■ 27.2
SMARCE1-208ENST00000474246 CRLF2Q9HC73 371 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 LAMB2P55268 1798 aa6.6□□□□□ -1.35
SMARCE1-208ENST00000474246 RGPD8O14715 1765 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 GOLGA8AA7E2F4 631 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ZBBXA8MT70 800 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ENC1O14682 589 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 RIPK2O43353 540 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 TPM1P09493 284 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PECAM1P16284 738 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ZNF3P17036 446 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 GRSF1Q12849 480 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 GRIK3Q13003 919 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PRKG1Q13976 671 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms