RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 MTMR1Q13613 665 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 MFSD5Q6N075 450 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 BTNL9Q6UXG8 535 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 TAS1R1Q7RTX1 841 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 ADGRE4PQ86SQ3 457 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 LDLRAD3Q86YD5 345 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 GIMAP8Q8ND71 665 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 SHCBP1Q8NEM2 672 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 OR14K1Q8NGZ2 314 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 EXTL1Q92935 676 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 LRRC37BQ96QE4 947 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 MPHOSPH9Q99550 1183 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 ACE2Q9BYF1 805 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 IFT122Q9HBG6 1241 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 ZNF277Q9NRM2 450 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 MKS1Q9NXB0 559 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 DPP7Q9UHL4 492 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 SAP30BPQ9UHR5 308 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 EVLQ9UI08 416 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 TRHDEQ9UKU6 1024 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 PTPN22Q9Y2R2 807 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 RBM8AQ9Y5S9 174 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 GPR45Q9Y5Y3 372 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 SLC30A1Q9Y6M5 507 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 WASHC2CQ9Y4E1 1318 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 A0A0A6YYK5 440 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 A0A1W2PR48 441 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 A0A1W2PRX2 142 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 E2F8A0AVK6 867 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 LCHNA4D1U4 455 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 FAM171A2A8MVW0 826 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 CYP27B1O15528 508 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 RAD17O75943 681 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 TOX4O94842 621 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 LPLP06858 475 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 VCAM1P19320 739 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 AGXTP21549 392 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 MTNR1BP49286 362 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 SLC16A1P53985 500 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 HHEXQ03014 270 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 MGAT5Q09328 741 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 TRIM25Q14258 630 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 CSRP2Q16527 193 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 MUM1L1Q5H9M0 696 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 LRCH2Q5VUJ6 765 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 PDZD4Q76G19 769 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 KCNK18Q7Z418 384 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 POLNQ7Z5Q5 900 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 LYSMD2Q8IV50 215 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 C1orf162Q8NEQ5 155 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 AGAP2Q99490 1192 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 SOX7Q9BT81 388 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 QRSL1Q9H0R6 528 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 GREM2Q9H772 168 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 RCAN3Q9UKA8 241 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 RPTORQ8N122 1335 aa4.41□□□□□ -1.7
ECHDC1-213ENST00000474240 KLHL33A6NCF5 533 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 C2orf78A6NCI8 922 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 KATNA1O75449 491 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 ALDH1A2O94788 518 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 ENDOD1O94919 500 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 HNRNPLP14866 589 aaKnown RBP eCLIP4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 CRHR1P34998 444 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 NPEPPSP55786 919 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 DUSP2Q05923 314 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 MALLQ13021 153 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 RIN1Q13671 783 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 FAM50AQ14320 339 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 ADRM1Q16186 407 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 TOR2AQ5JU69 321 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 PGM2L1Q6PCE3 622 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 GAREM2Q75VX8 874 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 TAX1BP1Q86VP1 789 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 RPUSD2Q8IZ73 545 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 CMTM4Q8IZR5 234 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 ZNF480Q8WV37 535 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 CFHR4Q92496 578 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 CHMP4CQ96CF2 233 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 FAM89AQ96GI7 184 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 FDXACB1Q9BRP7 624 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 ADI1Q9BV57 179 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 VTA1Q9NP79 307 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 IL23AQ9NPF7 189 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 RBM12Q9NTZ6 932 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 DDX56Q9NY93 547 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 EDARQ9UNE0 448 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.71
ECHDC1-213ENST00000474240 GABRDO14764 452 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 PRAMEF4O60810 478 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 PDGFRBP09619 1106 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 C1SP09871 688 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 MYBL2P10244 700 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 CCND1P24385 295 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 ATP2C1P98194 919 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 SRSF2Q01130 221 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 CD69Q07108 199 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms