RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SMC1AQ14683 1233 aaKnown RBP20.57■□□□□ 0.88
CCDC171-206ENST00000474193 STK38Q15208 465 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 ZRSR1Q15695 479 aaKnown RBP20.57■□□□□ 0.88
CCDC171-206ENST00000474193 ARL6IP4Q66PJ3 421 aaKnown RBP20.57■□□□□ 0.88
CCDC171-206ENST00000474193 SLC27A1Q6PCB7 646 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 AGMOQ6ZNB7 445 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 ADGRD2Q7Z7M1 963 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 NT5C3AQ9H0P0 336 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
CCDC171-206ENST00000474193 PRKAG3Q9UGI9 489 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 KCNG1Q9UIX4 513 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 IPPQ9Y573 584 aa20.57■□□□□ 0.88
CCDC171-206ENST00000474193 PLXNA4Q9HCM2 1894 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 EYA4O95677 639 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 IL9P15248 144 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 ARF4P18085 180 aaPredicted RBP20.56■□□□□ 0.88
CCDC171-206ENST00000474193 GTF2F1P35269 517 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCDC171-206ENST00000474193 LTBRP36941 435 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 EFNA5P52803 228 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 GIT2Q14161 759 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 APBB1IPQ7Z5R6 666 aaPredicted RBP20.56■□□□□ 0.88
CCDC171-206ENST00000474193 FAM178BQ8IXR5 827 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 USP28Q96RU2 1077 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 ADPGKQ9BRR6 497 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 TMEM175Q9BSA9 504 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 NRDE2Q9H7Z3 1164 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 FAN1Q9Y2M0 1017 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 GIT1Q9Y2X7 761 aa20.56■□□□□ 0.88
CCDC171-206ENST00000474193 A0A1B0GUA9 196 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 MEIS3P2A8K0S8 358 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 FSCN2O14926 492 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 PER2O15055 1255 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 LINC01565O15544 149 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 CXCL14O95715 111 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 GALTP07902 379 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 KRT85P78386 507 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 SMAD4Q13485 552 aaKnown RBP20.55■□□□□ 0.88
CCDC171-206ENST00000474193 PRPF4BQ13523 1007 aaKnown RBP20.55■□□□□ 0.88
CCDC171-206ENST00000474193 CLUL1Q15846 466 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 DUSP6Q16828 381 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 IGSF21Q96ID5 467 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 APOL6Q9BWW8 343 aa20.55■□□□□ 0.88
CCDC171-206ENST00000474193 EIF2AQ9BY44 585 aaKnown RBP20.55■□□□□ 0.88
CCDC171-206ENST00000474193 VWA3AA6NCI4 1184 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 N4BP3O15049 544 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 POMCP01189 267 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 LIG1P18858 919 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 DNM1Q05193 864 aaKnown RBP20.54■□□□□ 0.88
CCDC171-206ENST00000474193 SLC39A14Q15043 492 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 FAM187BQ17R55 369 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 PPP4R3CPQ6ZMV5 832 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 DDX53Q86TM3 631 aaKnown RBP20.54■□□□□ 0.88
CCDC171-206ENST00000474193 GJD3Q8N144 294 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 VPS52Q8N1B4 723 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 MRPL43Q8N983 215 aaKnown RBP20.54■□□□□ 0.88
CCDC171-206ENST00000474193 SMG8Q8ND04 991 aaKnown RBP20.54■□□□□ 0.88
CCDC171-206ENST00000474193 DRC1Q96MC2 740 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 POP1Q99575 1024 aaKnown RBP20.54■□□□□ 0.88
CCDC171-206ENST00000474193 FZD8Q9H461 694 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 PARP2Q9UGN5 583 aa20.54■□□□□ 0.88
CCDC171-206ENST00000474193 PHLPP2Q6ZVD8 1323 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 REV3LO60673 3130 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 E9PMD0 336 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 K7ERI5 159 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 MBTPS2O43462 519 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 NPTXRO95502 500 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 YEATS4O95619 227 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 PRKCBP05771 671 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 CDC25AP30304 524 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 NASPP49321 788 aaPredicted RBP20.53■□□□□ 0.88
CCDC171-206ENST00000474193 DLX2Q07687 328 aaPredicted RBP20.53■□□□□ 0.88
CCDC171-206ENST00000474193 ECM1Q16610 540 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 AMHR2Q16671 573 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 CDCA2Q69YH5 1023 aaPredicted RBP20.53■□□□□ 0.88
CCDC171-206ENST00000474193 CALML4Q96GE6 196 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 AK8Q96MA6 479 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 RPS6KC1Q96S38 1066 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 GAD1Q99259 594 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 TIPINQ9BVW5 301 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 C1QTNF1Q9BXJ1 281 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 PCDHGC5Q9Y5F6 944 aa20.53■□□□□ 0.88
CCDC171-206ENST00000474193 ARL5CA6NH57 179 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 CCDC169A6NNP5 214 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 PP2D1A8MPX8 630 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 ACKR2O00590 384 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 SPTLC2O15270 562 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 B4GALT5O43286 388 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 TBX10O75333 385 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 SSBP05455 408 aaKnown RBP eCLIP20.52■□□□□ 0.88
CCDC171-206ENST00000474193 MARCKSP29966 332 aaPredicted RBP20.52■□□□□ 0.88
CCDC171-206ENST00000474193 UBA7P41226 1012 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 COASYQ13057 564 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 PTPAQ15257 358 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 SMAD2Q15796 467 aaKnown RBP20.52■□□□□ 0.88
CCDC171-206ENST00000474193 ZNF280BQ86YH2 543 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 LINC00301Q8NCQ3 95 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 RASSF8Q8NHQ8 419 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 KCNG4Q8TDN1 519 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 C17orf75Q9HAS0 396 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms